Gene Athe_1730 details

Gene Information

• Locus tag: Athe_1730
• Symbol: rplF
• ID: 7409247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerocellum thermophilum DSM 6725
• Kingdom: Bacteria
• Replicon accession: NC_012034
• Strand: -
• Start bp: 1813494
• End bp: 1814042
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643716108
• Product: 50S ribosomal protein L6
• Protein accession: YP_002573597
• Protein GI: 222529715
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000672522
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGTAGAAA ACCTATTGAT ATACCCAGCG GTGTTGATGT CAAGATAGAT 
GGAAATGTCA TCACAGTAAA AGGACCAAAA GGAACACTTA CAAGAGAAAT ACATCCTGAA 
ATGATTGTTA AGATAGAAAA CAATCAGATA ATTGTTCAAA GACCTTCTGA TGAGAGGTTC 
CACAAAGCTC TGCATGGTCT TACTCGCACA CTTATTGCAA ACATGGTAGA AGGAGTAACA 
AAAGGTTATG AAAAAGTATT AGAAGTTGTC GGAATAGGTT ACAGAGCTCA AAAACAGGGC 
AAGAAACTTG TACTCAATGT TGGATATTCA CACCCTGTTG AGATTGAAGA GCCTGCTGGC 
ATTACTATTG AAGTTCCTGA CCAGAACAGG ATAGTAGTCA AAGGAATTGA CAAGCAACAG 
GTTGGCAACT TTGCTGCAAA TATAAGAAAA GTAAGAGAAC CTGATCCATA TCTTGGGAAA 
GGCATTAAAT ATGCTGATGA AGTTTTGAGA CTCAAAGAAG GAAAAGCCGG CAAAGGCGGT 
AAGAAATAG 

 

Protein sequence

MSRIGRKPID IPSGVDVKID GNVITVKGPK GTLTREIHPE MIVKIENNQI IVQRPSDERF 
HKALHGLTRT LIANMVEGVT KGYEKVLEVV GIGYRAQKQG KKLVLNVGYS HPVEIEEPAG 
ITIEVPDQNR IVVKGIDKQQ VGNFAANIRK VREPDPYLGK GIKYADEVLR LKEGKAGKGG 
KK