Gene Athe_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1717 
Symbol 
ID7409234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand- 
Start bp1806209 
End bp1807183 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content39% 
IMG OID643716095 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002573584 
Protein GI222529702 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000116881 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAGAAT TTCAAAAACC AACAATAAGG TGTGAAGAGC TGAGCCCAGA CAATAAATAC 
GGGCGATATG TTATTGAGCC TCTGGAGAGA GGTTATGGTA TAACGGTTGG TAATGCACTT 
AGAAGGACAC TTTTGTCGTC GCTACCTGGT GCAGCAGTCA CAGCAGTTAA GATTGATGGG 
GTATTACATG AGTTTTCAAC AATTCCAGGG GTCTTAGAAG ATGTACCAGA GATAATACTC 
AATTTAAAAG GCTTGGCTAT CAAGATGTCA TCCCCAGGGC CAAAGGTAAT GTACATTGAG 
GCTCAGGGTG AGTGTGAAGT AAAAGCAAAA GATATAAAAG CAGATGCTGA TATAGAGATT 
TGCAATCCAG ACCATCATAT TGCGACACTT AACCAAGATG CAAGACTTTT TATGGAGATA 
ACAGTAAATC AAGGCAAAGG TTATGTGCTG GCTGAAAGAA ACAAACAGCC AAACCAACCA 
ATAGGTGTTA TCCCTGTTGA TTCTATTTAT ACGCCTGTTG TAAAAGTCAA CTATAAGGTT 
GAAAATACAA GAGTTGGTCA GGTAACCGAC TATGATAAGT TGACTATGGA GATATGGACA 
AACGGAACTA TTCGTCCAGA TGAAGCGCTA ACTGTTGCTG CAAAGATTTT AATAGAACAT 
TTTAACCTGT TTACTGATCT TTCTAATATT CCTACAAAGA TTGAGACAGT TGTAAAACAA 
GAGCCGCCGA AGAGAAATAA ACTTTTAGAT ATGACCATAG AAGAGCTTGA GCTTTCAGTA 
AGGTCATACA ACTGTCTTAA AAGAGCGGGG ATAAACACAG TTGAGGACCT TGTCAACAAG 
ACTGAAGAAG AGATGATGAA GGTAAGGAAC TTGGGCAAAA AATCCTTAGA AGAGGTTATC 
CAAAAACTTC ACAGTTTGGG ACTTAGCCTC AAAAAGAGTG ATAGCACGCC GAAGGAGGAG 
GAAGAAGAGA AATGA
 
Protein sequence
MIEFQKPTIR CEELSPDNKY GRYVIEPLER GYGITVGNAL RRTLLSSLPG AAVTAVKIDG 
VLHEFSTIPG VLEDVPEIIL NLKGLAIKMS SPGPKVMYIE AQGECEVKAK DIKADADIEI 
CNPDHHIATL NQDARLFMEI TVNQGKGYVL AERNKQPNQP IGVIPVDSIY TPVVKVNYKV 
ENTRVGQVTD YDKLTMEIWT NGTIRPDEAL TVAAKILIEH FNLFTDLSNI PTKIETVVKQ 
EPPKRNKLLD MTIEELELSV RSYNCLKRAG INTVEDLVNK TEEEMMKVRN LGKKSLEEVI 
QKLHSLGLSL KKSDSTPKEE EEEK