Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1560 |
Symbol | |
ID | 7409069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1651801 |
End bp | 1652478 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643715933 |
Product | spore cortex-lytic enzyme |
Protein accession | YP_002573431 |
Protein GI | 222529549 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTGTA TAAAAGCATT AATACTACTA ATACTTTTGA GTTTGAGCGT ATATACTATA GCAAACTATC AACACCTTAA ATTCAAATAT GCTCTTTCTC CAATTATTCT TTCATACTAT GGCTCTACAG GGCCAGAGGT TATTGAAATA CAAAAAAGAC TTAAGCAGTG GGGATATTAC GATGGGCCAA TTGACGGTAT TTATGGATAT AAAACATATA TGGCAGTAAG ATACTTTCAG GCAAAAAACG GCCTTAAAGT AGATGGAATT GCAGGAAGCG AAACTCTCAG GGCACTTGGA ATTGTCACAA CAACACGTTC ATCGTACAGT TCAGACCTCA ACCTTCTTGC TCATCTTATC AGCGCAGAAG CGCGGGGAGA ACCTTATGTC GGACAAGTTG CAGTAGGAGC AGTGGTGCTA AATAGAGTAA GACATCCAAG CTTTCCAAAT TCAATAGCAG GTGTGATCTA CCAACCAGGT GCTTTTGAGT CTGTAGCAAA CGGCCAGATA AACCTTTCGC CGACAGTATC AGCAATAAAC GCTGCAAGGG ATGCACTAAA TGGCTGGGAC CCAACAGGTG GCGCAATTTA CTTTTTCAAC CCTGCAAAAA CTACAAATAA ATGGATTTGG AGCAGACCAA TTGTAGCTGT CATAGGCAAT CATGTATTCG CAAGGTAA
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Protein sequence | MRCIKALILL ILLSLSVYTI ANYQHLKFKY ALSPIILSYY GSTGPEVIEI QKRLKQWGYY DGPIDGIYGY KTYMAVRYFQ AKNGLKVDGI AGSETLRALG IVTTTRSSYS SDLNLLAHLI SAEARGEPYV GQVAVGAVVL NRVRHPSFPN SIAGVIYQPG AFESVANGQI NLSPTVSAIN AARDALNGWD PTGGAIYFFN PAKTTNKWIW SRPIVAVIGN HVFAR
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