| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1545 |
|---|
| Symbol | |
|---|
| ID | 7409053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1634162 |
|---|
| End bp | 1634854 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643715917 |
|---|
| Product | pseudouridine synthase |
|---|
| Protein accession | YP_002573416 |
|---|
| Protein GI | 222529534 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGT GCGGTGTTGC TTCCCGGCGG AAGTGTGAAG AGATTATCCT GCAAGGAAGA
GTAAAAGTAA ATGGGAAGAC TGTGAACCAG CTTGGGTTCA AGGTTGACCC AGAAAAAGAT
GTGGTTGAAG TAGATGGAAA GAGGATATCC CTGCAGATGC AGAAGGTATA TATAATGCTT
AACAAACCTT TTGGTGTTAT TTCTTCTGCA AAGGATGAAA AGGGAAGAAA AACAGTGGTT
GATTTGGTGA AGGACAAAGT AAATGTAAGA GTATTTCCTG TGGGGAGGCT TGATTTTGAT
ACAACTGGCT TGATTATTCT TACAAATGAT GGTGAATTTG CATATAAAGT CACACACCCA
AAACACGATA TTGAAAAGAC TTATATAGTC TTAATCAAAG GCATTCCTTC TAAGGAAGAG
ATAGAAAGGT TTGAAAAAGG ACTTTTAATA GATGGGAAAA TGACTGCGCC TGCCAAATTT
AAGATTTTAA AGCTTATAAA TGGTAATGCT CTGGTTGAGA TAAAAATCCA TGAGGGAAGG
AATAGGCAGA TAAGAAAAAT GTGTGACCAA ATTGGTCATA AGGTTTTGAA GTTAAAAAGG
GTTGCAATTG GCAAACTCCA GCTTGGAAAA CTAAAAGAAG GGGAATTTGT TTTCTTAGAT
AGAGAAACAG CAAACAAGGT GTTTGAAAAA TGA
|
|---|
| Protein sequence | MAQCGVASRR KCEEIILQGR VKVNGKTVNQ LGFKVDPEKD VVEVDGKRIS LQMQKVYIML
NKPFGVISSA KDEKGRKTVV DLVKDKVNVR VFPVGRLDFD TTGLIILTND GEFAYKVTHP
KHDIEKTYIV LIKGIPSKEE IERFEKGLLI DGKMTAPAKF KILKLINGNA LVEIKIHEGR
NRQIRKMCDQ IGHKVLKLKR VAIGKLQLGK LKEGEFVFLD RETANKVFEK
|
|---|
| |