| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1511 |
|---|
| Symbol | |
|---|
| ID | 7408170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1597012 |
|---|
| End bp | 1598685 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643715874 |
|---|
| Product | diguanylate cyclase with GAF sensor |
|---|
| Protein accession | YP_002573382 |
|---|
| Protein GI | 222529500 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00005186 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACTG AAAAAATAGC AATTGAAAGG GAATACATAA AAATTTCATG GTTTTTAATT
TTATCAATTG CAGTGTACTT ACTTTTTGAT AAGCTGTTAT TTTCACCTAC TTTAGAAACA
CTTTCTTTTT CACAGTGGCT TGTTCCTCTA ATATTTTTGT TTATTTCATC AGCCTACAAT
ATATTCAAGA TATGGCTTTT TGGTAAGAAT GGACAGATTA ATGAAGAGAT TTTTAGGTAT
TTGAAATTTT TTGAGGTTGT AAATCTTGTA TTCTTTTTCG GATATGAGAG GCTTTTTGAT
TTGATGTTTG TCATATCGCT TGTATTCCTA TTTTACATTG AAAGAATAAA TATGAGAAAT
TTAAGGCAGG TAGCAATGGT TTTGATTTTT TCATATACAT TTTTTATATT TCTCGATTTT
ATTACAAACA ATATCACCAG CGAAGATTTG AGAAACCTAT TTTATATTCT ATTTTATATC
TTTTGGTTTT CTTATTCTAA CAAACTTGAG GTCTTTGAAA AAAGTCAAAC TAATGAAATT
AGTATAAAAC TAAAACAGTA CGAAGAAAAT TTAAGAAACC AACAGCTGCT TAGTGAGGCA
AAAGATGCAA AAATTAAAGA ATTGGAAAGG GAAATAAGTT ATCTGAAGGA GATTAACAAA
AGACTAAACA TCTCTCTGGG GGAATTTTTT AACCTTCAGG AAATTAGTAA AATAATAACA
CAAATACTTG ATACTAATGA ACTTTTAAAG TTTGTTAATG ATGTTTTAAT TGGAGTCACT
GGTGTTGACA AAAGCTCTAT ACTGTTATTT AATAAAGAAA AAACAGAGCT TTATGTTGCA
TTTTCTAACC TTCCAGAGAA CGAACAAAAA GAAAGCTTTA AGCAGGAGAA TATAGGGTGG
CTCAGAAGTG TTGCATTAAA TTGTGAAAAT GGCTATAGGA ATAAGGTGAG CAGTGAAGAT
TGTCCTTTCA TAAATGGAAG AGCTACAAAG TCGATAATGT ATGCTTCATT GGCAACAAAA
AATGACAGGT ATGGAATAAT ACTACTCGAA CATATATTTG AAGATGTATT TACAGAAGAC
AATCTTAGAT TTTTAACATC CATTGCTGCA CAAGTTTCAA TTGCATTGGA AAACTCAAGT
TTGTATCAGC AGATGAGGTC AATGGCTATG GTTGATGGGC TAACGGGTGC TTTCAATAGA
ATATATCTTT ATGAAGTCTT AGAAAGAGAG ATTCAGGCAT CTGCAGGAAG ATATCCGATT
AGCATTGCTC TTTTTGATGT TGATAATTTT AAAAAGTTAA ATGATACATA CGGGCATTTG
TTCGGAGACA AGGTGTTGCA AACGATAGTT AGAATAGCAA GAGAAAAGGT GCGAAAAGGT
GATATTGTTG CACGTTATGG AGGAGAGGAA TTTATAATAG TCTTTAATCA CCTTGAAAGT
AATGAAGCTT ACAAGGTAGT TGAGAGAATC AGAAGAGCTA TTGAAAGTGA AATAATAGAA
GATAATTTGA TTCAGACTCG AGTGACAGTT AGCTTTGGTA TTGCTTCTTA TCCTTTGCAT
GCTGACAATG TAAAAGATCT TATTAAATGT GCAGATATTG CAATGTATAG AGCAAAAAGT
AGTGGGAAAA ATTGCACAGT AGTATATAAT CAGGAATTGG AGATGAAAGT ATGA
|
|---|
| Protein sequence | MSTEKIAIER EYIKISWFLI LSIAVYLLFD KLLFSPTLET LSFSQWLVPL IFLFISSAYN
IFKIWLFGKN GQINEEIFRY LKFFEVVNLV FFFGYERLFD LMFVISLVFL FYIERINMRN
LRQVAMVLIF SYTFFIFLDF ITNNITSEDL RNLFYILFYI FWFSYSNKLE VFEKSQTNEI
SIKLKQYEEN LRNQQLLSEA KDAKIKELER EISYLKEINK RLNISLGEFF NLQEISKIIT
QILDTNELLK FVNDVLIGVT GVDKSSILLF NKEKTELYVA FSNLPENEQK ESFKQENIGW
LRSVALNCEN GYRNKVSSED CPFINGRATK SIMYASLATK NDRYGIILLE HIFEDVFTED
NLRFLTSIAA QVSIALENSS LYQQMRSMAM VDGLTGAFNR IYLYEVLERE IQASAGRYPI
SIALFDVDNF KKLNDTYGHL FGDKVLQTIV RIAREKVRKG DIVARYGGEE FIIVFNHLES
NEAYKVVERI RRAIESEIIE DNLIQTRVTV SFGIASYPLH ADNVKDLIKC ADIAMYRAKS
SGKNCTVVYN QELEMKV
|
|---|
| |