Gene Athe_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1462 
Symbol 
ID7408120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1546337 
End bp1547104 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content32% 
IMG OID643715825 
Productpolysaccharide deacetylase 
Protein accessionYP_002573333 
Protein GI222529451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02764] polysaccharide deacetylase family sporulation protein PdaB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAG TGTTTAACAT TTCCAAAATT ATGAAGCTGG TCCTAATCAC AATTCTTGTT 
TTGCTTACAA TAAATACTAT ATTTATCTAT TCAAGGCTAA CTGTAGAGGT TATAAATCAA
AAAAAGCTTC TACCAATTTA CTGTGTTGAC AGAAATGACA AGAAAATAGC GTTAACATTC
GATGCTGCAT GGGGAAACGA CGATACAAAA GAACTGCTTA GTATACTCAA AAAATTCAAT
GCAAAAGCTA CTTTTTTCCT TGTAGGATTT TGGGTAGAGA AATATCCTGA AGATGTAAAA
AATATCTTCA GTCAAGGGCA TGAAATAGGA AGCCATTCTA ACAAGCATCT TCACATGTCA
AGATTATCTG AATCTGAGAT AATTAGAGAT GTCAAAAGCT GTGAAGAAAA AATTATGAGA
ATTATTCATA AAAAGCCAGT GGTTTTTAGA CCTCCATATG GCGATTACAA TAACACTTTA
ATAAGAACTC TTTCTTCCTT GGGATATTAT GTTATCCAAT GGGATGTTGA TTCACTTGAT
TGGAAAGATT TATCTGCCCA AGAGATTGCA CAGAGAGTAT TAAAGAGAGT AAAAAGCGGT
TCAATTGTAT TGTTTCATAA TAATGCCAAA AATACTAAAT TCGCTCTGTC AATTATACTA
AGTAGTCTTT CCAAGCAGGG ATATCAATTT GTAACAGTAT CAGAGCTAAT ATACAAAGAT
GGTTATTATG TTGACCATCA AGGTGTTCAG AGGAAAATAG TAAGGTGA
 
Protein sequence
MIRVFNISKI MKLVLITILV LLTINTIFIY SRLTVEVINQ KKLLPIYCVD RNDKKIALTF 
DAAWGNDDTK ELLSILKKFN AKATFFLVGF WVEKYPEDVK NIFSQGHEIG SHSNKHLHMS
RLSESEIIRD VKSCEEKIMR IIHKKPVVFR PPYGDYNNTL IRTLSSLGYY VIQWDVDSLD
WKDLSAQEIA QRVLKRVKSG SIVLFHNNAK NTKFALSIIL SSLSKQGYQF VTVSELIYKD
GYYVDHQGVQ RKIVR