Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1413 |
Symbol | |
ID | 7409156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1497769 |
End bp | 1498650 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643715776 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002573284 |
Protein GI | 222529402 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0119542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTAA TATACGTGGT AAAAAAAGAA GATTTGAACA TGACATATAA ACAGATATTG CAAAAAAGAC TCTTTTTTTC TTCAACGCTG ATGAGCAGGT TAAAGGCACT TGGTCAAATA AGATTTATTC CTCCAATCTA TTCTGTGCAT CAATATCCAC AAGAAAATGC TGTAATTGAA GTCGATTTGA TATTTTCCAA ATCAAACATA GTTCCTGTTG AAGGAAGCAT AGACATATTG TATGAGGACA ACTTCTTTTT ATTTGTAAAC AAACCTTCTG GTTTACCTTC ACACCCTTCT AAAGGACATT ACTTTGATAC AATCGCAAAC TATGTTGAGT ATTATTTAAA TTCTAAAAAC CTTACTTCAC ACATTATAAA CAGGTTAGAT AAAGATACAT CAGGGATAGT TGTATTTGCT AAAAATTCTT ACTTTCACAG CATTGTTTCA TATGAGTTTG AAAAAAGACG AGTTGATAAG ACATATATTG CAATTGTTCA CGGAATACTC ACAAAAAAAA GCGGGCTTAT TGAAAAACCC ATTAAACGCT CAGATGATGG CATCAAAAGA GAAATTCATC AAGATGGTAG TTTTGCTTCC ACATACTATG AAGTTATTGA TTCTTTTGAA AACTTCTCAG TGTTAAAGTT AAAACCAATA ACGGGCAGAA CACATCAACT AAGAGTTCAC TTATCATCAA TTGGTCATCC AATTGTAGGG GACTACATTT ACGGCGAAGA AAAAACACAA AATACCCCTT TACTTCTTCA CGCTTATTCG ATAAGTTTTA ATTTCAAACT AATTAATAAT AAAGTCTATG ATATTACTTC TCCACTACCA CATTATTTTC ACGAGTTTGC TGGAAGACAC CTTGAGTTTT GA
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Protein sequence | MKLIYVVKKE DLNMTYKQIL QKRLFFSSTL MSRLKALGQI RFIPPIYSVH QYPQENAVIE VDLIFSKSNI VPVEGSIDIL YEDNFFLFVN KPSGLPSHPS KGHYFDTIAN YVEYYLNSKN LTSHIINRLD KDTSGIVVFA KNSYFHSIVS YEFEKRRVDK TYIAIVHGIL TKKSGLIEKP IKRSDDGIKR EIHQDGSFAS TYYEVIDSFE NFSVLKLKPI TGRTHQLRVH LSSIGHPIVG DYIYGEEKTQ NTPLLLHAYS ISFNFKLINN KVYDITSPLP HYFHEFAGRH LEF
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