| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1285 |
|---|
| Symbol | |
|---|
| ID | 7408866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 1375847 |
|---|
| End bp | 1377991 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643715650 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002573158 |
|---|
| Protein GI | 222529276 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000916129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGGC TAAAAGAATT AAATGATCAG CAAAAAGAGG CGGTTCTTTC AACAGAAGGG
CCGCTTTTAG TATTGGCTGG TGCAGGTTCA GGGAAAACTC GTGTCATAAC ATATAGAATA
GCATATATAT TGAATATGGG ATTAGCAAAT CCGGCTAATA TCCTTGCAAT TACGTTTACA
AACAAAGCTG CTGATGAGAT GAAAGAAAGA ATAAAAAGGC TTGTTAGCAC CCAATCATTT
TCAGAGATGT GGGTGTCTAC TTTTCATGCT GCGTGTGCAA GGATTTTGAG AATGGAAGCT
CATAATATAG GGTTTTCAAA CAACTTTGTA ATATTTGATG CACAGGATAG AAACCAGCTT
TTGAAAGAGT GTTTTGACAA GCTAAACATC GACACAGAGA GGCTTGATAT CAGATATGTA
TCAAGGCAGA TTAGCAATTT CAAAAATCAG TTAATTGGGC CTTCTGATGT ATACAGATAC
GGTAATGTTG ATGGTCGTGT TGTTGAAGTA TATAAACTTT ATAATAAACT TCTGAAAGAA
TACAATGCGT TTGACTTTGA TGACCTTTTG TATTACACTG TAGTTCTTTT TGAAACAAAC
CCTGATATTT TAGAGAAATA TCAAAACAAG TTTAAATATA TCTTGGTAGA TGAGTACCAG
GACACTAATC GCGCTCAGTT TTATTTTATT TATTTACTTT CACAGAAACA CAGAAATGTC
TGTGTTGTCG GTGATGACGA CCAAAGTATA TACAGTTTCA GAGGAGCAAA TATAAAAAAT
ATTTTGGAAT TTGAAAAGGT GTTTAGCGAT GCCAAGGTGA TAAAATTAGA AAAAAACTAC
AGGTCTACAA AGATAATACT ATCAGCTGCA AATGAGGTTA TAAAAAACAA CAATTACAGA
AAATTTAAAA AATTGTGGAC AGATAACATT GATGGCGAAA AGATTTTTCT GTACTCAGCT
TTTGACGAAG TAAATGAAGC GGAGTTTGTT GCATCGAGTG TGAAAAATCT TATTGAAAGC
GGGATTTCCC CCTCAGAAAT AGGAGTGCTC TACCGAACAA ATGCTCAATC TGTAAACTTT
GAGAATGCAC TTTCAGCTTA TTCTGTACCC TATAAAGTTG TAGGTGCTTT GCGATTTTAT
GAAAGAAAAG AAATAAAAGA TATAATTGCT TATTTGAGAC TTATCACAAA TCCGCATGAC
GATTTGAGTC TATTTAGGAT TATCAATGTT CCCAGAAGAG GAATTGGGAA CAGTACTTTA
GAGAAAATAA AAGTTTTGAG TGAAGAGTAT GGCGTTTCAG CGTATACAGT TTTACTCGAG
CGAGCAAAGA TTGATTTTGA CAAGAAGATA TATGAAAAGC TGAATAGGTT CACTTTGTTA
ATAGAAGATT TAAAAGCTGA GGCAGAAAAT TTGTCTGTAA CTCAGACCAT TAAACTTGTG
CTTGACAAGA CAGGGTATTT AGAAAGTTTG CTCAGTAGCA AAAGTGAAGA GGAGTTTCAA
AGAGCTAAAA ATATTGAACA GCTTATAAGC ACTGCAGCTA TTTTTGAAGA AGAAAATGAA
GAGCCAACCT TGCAAAATTT TTTGAACTCT ATTACTTTGA GTTCTGAAGA TGAAGATACT
CAAAAAGAAG AGAAAGTTTC ACTTATGACA GTTCATGCTG CAAAAGGATT GGAATTTGAA
GTTGTCTTTC TCACAGGACT TGAAGAAGGA TTGTTTCCAC TTGTTAGGGC AGAAGAACCC
ATTGATGCTG AAAAGGAACT TGAAGAAGAA AGAAGACTGT GTTATGTTGC AATTACCAGA
GCAAAAAAGC TTCTTGTTCT GACATATGCT AACAATCGAA GAGTATTTGG CAAGTTTTCT
TCACGACAAA GGTCTTGTTT TATTGAAGAG ATTCCGCAGA AGTACATTCA GGTTGTTCAC
AATCCTATTA CTAAAATTCA AGGGAATTTT GCCGTCAAAA ATGGTAAGGA AGAAAATATA
TCAAGTAGCA ATCTGCATGT GGGGAGCAAG GTTAAGCATG GCAAGTTTGG AGTTGGGAAG
GTTATTTGGC TTTCAGACGA TATGAAAGAG GTAGTAGTAG AGTTTGAAGA GATTGGTCAG
AAGAGGTTGC TTCTGTCATA TGCAAATCTC AAGAGGATTG GTTGA
|
|---|
| Protein sequence | MEWLKELNDQ QKEAVLSTEG PLLVLAGAGS GKTRVITYRI AYILNMGLAN PANILAITFT
NKAADEMKER IKRLVSTQSF SEMWVSTFHA ACARILRMEA HNIGFSNNFV IFDAQDRNQL
LKECFDKLNI DTERLDIRYV SRQISNFKNQ LIGPSDVYRY GNVDGRVVEV YKLYNKLLKE
YNAFDFDDLL YYTVVLFETN PDILEKYQNK FKYILVDEYQ DTNRAQFYFI YLLSQKHRNV
CVVGDDDQSI YSFRGANIKN ILEFEKVFSD AKVIKLEKNY RSTKIILSAA NEVIKNNNYR
KFKKLWTDNI DGEKIFLYSA FDEVNEAEFV ASSVKNLIES GISPSEIGVL YRTNAQSVNF
ENALSAYSVP YKVVGALRFY ERKEIKDIIA YLRLITNPHD DLSLFRIINV PRRGIGNSTL
EKIKVLSEEY GVSAYTVLLE RAKIDFDKKI YEKLNRFTLL IEDLKAEAEN LSVTQTIKLV
LDKTGYLESL LSSKSEEEFQ RAKNIEQLIS TAAIFEEENE EPTLQNFLNS ITLSSEDEDT
QKEEKVSLMT VHAAKGLEFE VVFLTGLEEG LFPLVRAEEP IDAEKELEEE RRLCYVAITR
AKKLLVLTYA NNRRVFGKFS SRQRSCFIEE IPQKYIQVVH NPITKIQGNF AVKNGKEENI
SSSNLHVGSK VKHGKFGVGK VIWLSDDMKE VVVEFEEIGQ KRLLLSYANL KRIG
|
|---|
| |