Gene Athe_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1182 
Symbol 
ID7408764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand+ 
Start bp1276024 
End bp1277052 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content34% 
IMG OID643715547 
Productaliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 
Protein accessionYP_002573055 
Protein GI222529173 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.794723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA AAAGATATTA TAAAGTAATT ACCTTCGTTA TATTGCCAAT TGCTTTTCTA 
TTTCTCCTTT CAGGATGCTA TGCAAGAAAA AAAGACAAAA ATCTAAAGGT AAGAATTGCA 
TTTTTCCCGA ACATAACTCA TGCCCAAGCA TTGGTAGGGA AAGAACTTGG TATTTTCCAA 
AAGAGAATAG GCAAGGATGT AAAAGTTGAA TATAAGGTTT TCAATGCAGG TCCGGCTGAG 
ATAGAAGCGT TTTTAGCAGA TGAGGTTGAC ATAGGCTATA TTGGACCTAT ACCAGCGATA 
AATGGATTTG CAAAGACAAA TGGAGAAATA AAGATTATTG CAGGAGCTAC AAACGGAGGA 
ATGATGCTGG TTTCAAGGCA GGATTTGAAT ATAAAGAATT TAGATGACTT AAAAGGCAAG 
AAAATTGCAG TTCCTCAATA TGGGAATACC CAAGATATTG TATTAAGGTT TTTGCTAAGC 
AAAGCTGGGC TAAAAGATAC TACCAAAGGT GGAGATGTTG AGATTATTCA AGCTGAAAAT 
CCAGACATTA AAACTTTGCT TGATAGAAAC CAGATAGATG CTGCGTTGGT TCCTGAGCCT 
TGGGGAACAA GGTTGAAAAA AGAAGTAAAT AGCAATGTTG TGCTTGACAG TAGCCAAATA 
AGGCAATACA TAGATATTCC TACAACAGTA ATTATTACTA CCACAAAGTT TTTAAAAGAG 
TATTCTGATA TTGTAGAAAA ATTTCTCATA GCGCATCTTG AGGTAACAGA CTTTATTGAA 
AAAAATCCTG AAAAATCATA TGAAATAATA AATAACCAAA TTTCTGAGAT AACTTCTAAG 
CCGCTGCCGG CAGACATCCT AAAAGACTCC TTCAAAAATA TCAAACTTTC AAGCGAAATA 
CAAAGGAAAT CCTTAGAAAA AGCAATTGAG TCATATTTTG AGTTGGGATA CTTAAGAGAA 
AAGCCAAATA TTGAAAAATT AGTTAACACA GAAATTTTAG ATAGAATCAA AAACAAAGAG 
GTGTACTAA
 
Protein sequence
MEIKRYYKVI TFVILPIAFL FLLSGCYARK KDKNLKVRIA FFPNITHAQA LVGKELGIFQ 
KRIGKDVKVE YKVFNAGPAE IEAFLADEVD IGYIGPIPAI NGFAKTNGEI KIIAGATNGG 
MMLVSRQDLN IKNLDDLKGK KIAVPQYGNT QDIVLRFLLS KAGLKDTTKG GDVEIIQAEN 
PDIKTLLDRN QIDAALVPEP WGTRLKKEVN SNVVLDSSQI RQYIDIPTTV IITTTKFLKE 
YSDIVEKFLI AHLEVTDFIE KNPEKSYEII NNQISEITSK PLPADILKDS FKNIKLSSEI 
QRKSLEKAIE SYFELGYLRE KPNIEKLVNT EILDRIKNKE VY