Gene Athe_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1179 
Symbol 
ID7408761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1272669 
End bp1273895 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content34% 
IMG OID643715544 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002573052 
Protein GI222529170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA ATCATCCTGA AAATTTTGTA GCCAACAAAA GACGTTATAT TTATATATTG 
TTAGGACTCA TTATTAATTT ATGCCTTGGT TCTGTATACT CATGGAGTGT GTTTAGAAAA
CCGCTGGAGC AATTATTTAA ACTAAGTGCA ACTGAAAGTA GTTTGCCATA CATGTTTTTT
CTTGTATTCT ATGCTATTTT GATGCCGCTT GCAGGAAGGG TTTTAGATAA GTTTGGACCA
CGGATGGTAT CAATAGTTGG AGGAATTTTA GTTGGTATTG GTTGGATTTT GGCAGGTTTT
TCTAATGGTT TGATAAATCT GATTCTGGGA TATGGAATTA TTGCTGGAAC TGGCGTGGGA
ATTGCGTATG GGGTACCAAT TGCAGTTTCT GCAAAATGGT TTGAAGACAA AAGAGGATTT
GCGGTTGGAC TAACTGTCTT AGGATTTGGC ATGTCACCTC TTATTACAGC ACCTATTGCA
AGAAAACTTA TACAGATGTA TGGTCCTCTT TTGACATTTA AAATATTAGG AGTAGTTTTT
CTGATTATTA TTATTTTATT ATCAATCCCA TTAAAGTTTC CATTTAGAGA AGTGAAAACT
GATGAAGAAT TTAAGACCAA AAAAGATAAA CTTTCTTATT CTCCTTCTGA GATGGTAAAA
ACAAAAACTT TCTGGGCTCT TTGGTTTTGC TTTGTTATAG GAACACTGAG TGGACTGATG
GCAATTGGAA TATCAAGCCC TGTTGGGCAG GAGATAATAA AGTTATCAGC TGAAACTTCT
GCTTTGTCAG TTTCTATATT TGCTATATTT AACGGGATTG GTCGGCCATT TTTTGGATGG
CTTGTTGATA AAATTACACC GAGGTTTGCG GCAATATTTA ATTTTTCTTT AATGTTTTTG
GCATCGATGG GTATGCTTTT TGCAAAAGAA AAAATGACTC TTTTATTTAT GATAACTTTT
AGTTTGTTGT GGTTGAGCTT AGGTGGCTGG CTCTCAATCG CACCAACTGC AACTGCACAG
TTTTTTGGAA CAATTCACTA TAGTAAAAAT TATGGTATTC TATTTACAGG ATACGGGGTA
GGGGCTCTTT TAGGAAACTT AATGTCTGGA AAAATAAGAG ATATTTTTGG GAGTTATATA
TTTAACTTCT ATATAACAGC CATATTATCA ATTATTGGAA TCATAATTAT TCTTTTTTAC
TTAAAACCAA CCAGAAAATA TGAATAA
 
Protein sequence
MIKNHPENFV ANKRRYIYIL LGLIINLCLG SVYSWSVFRK PLEQLFKLSA TESSLPYMFF 
LVFYAILMPL AGRVLDKFGP RMVSIVGGIL VGIGWILAGF SNGLINLILG YGIIAGTGVG
IAYGVPIAVS AKWFEDKRGF AVGLTVLGFG MSPLITAPIA RKLIQMYGPL LTFKILGVVF
LIIIILLSIP LKFPFREVKT DEEFKTKKDK LSYSPSEMVK TKTFWALWFC FVIGTLSGLM
AIGISSPVGQ EIIKLSAETS ALSVSIFAIF NGIGRPFFGW LVDKITPRFA AIFNFSLMFL
ASMGMLFAKE KMTLLFMITF SLLWLSLGGW LSIAPTATAQ FFGTIHYSKN YGILFTGYGV
GALLGNLMSG KIRDIFGSYI FNFYITAILS IIGIIIILFY LKPTRKYE