Gene Athe_1118 details

Gene Information

• Locus tag: Athe_1118
• Symbol: rplU
• ID: 7408700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerocellum thermophilum DSM 6725
• Kingdom: Bacteria
• Replicon accession: NC_012034
• Strand: +
• Start bp: 1212145
• End bp: 1212585
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643715484
• Product: 50S ribosomal protein L21
• Protein accession: YP_002572992
• Protein GI: 222529110
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0261] Ribosomal protein L21
• TIGRFAM ID: [TIGR00061] ribosomal protein L21

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00565538
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAATA TTCAATGCTA TAATATTGAA TGTTGTTTTA TGAGCGCTCG CAAAGGGCAA 
ATTGCTCCCG TAGCGGCGTG CAGGCAGAAT TTGAAAAATT TCTTAAAAGC AGGAGGTATG 
GAAAAGAAGA TGTATGCAAT AATTGAAACA GGTGGAAAGC AATATAAGGT GCAGGAAGGC 
GATGTTTTAA AGGTTGAAAA ATTAAAAGCT GATGTTGACT CTGTGGTAAA GATTGACAAG 
GTGCTGGCAA TTTCGTCCGA CGATGGGTTT GTTGTTGGAA AGCCATATGT AGATGGTGCA 
TATGTTGAAG CGAAGGTTTT AGAACATGCA AAAGATAAGA AAATCATAGT ATTTACTTAC 
AAATCAAAAA CAGGTTATCA CAGAAAGCTT GGACATCGCC AGTGGTATAC AAAGATTCAG 
ATAACAAAAA TAGCAAAGTA A 

 

Protein sequence

MGNIQCYNIE CCFMSARKGQ IAPVAACRQN LKNFLKAGGM EKKMYAIIET GGKQYKVQEG 
DVLKVEKLKA DVDSVVKIDK VLAISSDDGF VVGKPYVDGA YVEAKVLEHA KDKKIIVFTY 
KSKTGYHRKL GHRQWYTKIQ ITKIAK