Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1099 |
Symbol | |
ID | 7409656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1191058 |
End bp | 1192434 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643715465 |
Product | VanW family protein |
Protein accession | YP_002572973 |
Protein GI | 222529091 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0429527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAGGT TTATATTAAT TGGAATTGTT GTGGTGCTTT TGATAGCAAG CACAGTTCTG GGATATACTC TTTATACCAA TGTTACGAAA GTTCTTGATA CAGATAGGAT TTATAAAGGC ATTTATGTTG AGGGTGTTCA TTTGGGTGGA CTTACCACAG AAGAGGCTCT TGAGCTTTTA AAAAAGACTT ATTTTGAGCC ACTGCAGAAC AAAAAAGTTG AAGTTATAGT TGAAGACAAA AGCTATTTTC TTGAGTATTC TTCTCTTGGA ATAAAGATGG ATATTGACAA GGCAGTAGAA AAGGCATATT CAATTGGCAG AAAGGGCAAT TTTGCAACAC GGTTTAAAGA GATAAAAAAG GTTTATGAAA ATCCAGTGGT CATAAGACTT AATTTCGAAT ATGATGAAAA CAAACTCAAA AAGTTTGTAG ATGAACTTTT TAACACATAC TATCAATCGC CTGTTAATGC AAGTATCAAA AAAGTAGGAG ACCAGTTTGT TATAACTCCA GAGAGAATAG GGAAAAAACT TGATTATGGC TATCTTTTGA ATAAATTGAA AGACATAATT AAAAACAAGC AAGAAGGTAA GGTTTATGTA AGATTTTTAA GAATAACTCC GCGAATCACA GCGAGTGAAC TATCAAAAGT AAAAGAAATA ATAGGTTCGT TTACCACAAA GTTTGATAGT TCAAATGTTG CAAGAAGCGA AAATATAAGG GTAGCTGCCC AAAAGATAAA TGGTAGCTTA GTGATGCCGG GCGAAATATT TTCGCTGTCA AAGGTAATTG GACCTGTAAC AGTCGAAAAT GGTTTTAAAA TTGCAAAAGT TATTGTCAAT AATGAGTTTG TAGACGGTGT TGGTGGAGGG CTTTGTCAAA TAGCAACCAC TATGTACAAT GCAGTTTTGA TGGCCCAGCT GAAGGTTGTG GAAAGAGCAC CACATTCAGC TCTAATTTCG TACGTGCCAC CTGGCAGGGA TGCAACAATT GCTTCAGGTT CAATAGATTT TAAATTCAAA AATACAACAA ATGCGCCTAT CTATGTTGAA AGTTATACTT CCAAAAATAC TGTGACAGTC AACCTCTATG GCAAAAACAA TCATAAGGCT GAAATTGTCA AATTCGAATC GGAAATAATT GAAAGGGTAC CTTATAAAAA AGTCTACAAA AATGATCCAA CACTTCCTCA AGGAGTAGAA AAGCTTTCCA ATAAACCCCA GAATGGCTTA AAGGTAAAAA CTTATATGCT TGTTTATAAA GATGGCAGGT TAATAGAAAG AAAGCTTCTG TCCTATGACT ATTATAAACC TGTAAATGCT GTGATACTGG TTGGAACAAA AGCAAAAGAG ACCGTCTCTT CATCTGTTTA TGAGTAA
|
Protein sequence | MKRFILIGIV VVLLIASTVL GYTLYTNVTK VLDTDRIYKG IYVEGVHLGG LTTEEALELL KKTYFEPLQN KKVEVIVEDK SYFLEYSSLG IKMDIDKAVE KAYSIGRKGN FATRFKEIKK VYENPVVIRL NFEYDENKLK KFVDELFNTY YQSPVNASIK KVGDQFVITP ERIGKKLDYG YLLNKLKDII KNKQEGKVYV RFLRITPRIT ASELSKVKEI IGSFTTKFDS SNVARSENIR VAAQKINGSL VMPGEIFSLS KVIGPVTVEN GFKIAKVIVN NEFVDGVGGG LCQIATTMYN AVLMAQLKVV ERAPHSALIS YVPPGRDATI ASGSIDFKFK NTTNAPIYVE SYTSKNTVTV NLYGKNNHKA EIVKFESEII ERVPYKKVYK NDPTLPQGVE KLSNKPQNGL KVKTYMLVYK DGRLIERKLL SYDYYKPVNA VILVGTKAKE TVSSSVYE
|
| |