| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1081 |
|---|
| Symbol | |
|---|
| ID | 7409638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1175967 |
|---|
| End bp | 1176821 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643715447 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_002572955 |
|---|
| Protein GI | 222529073 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00468672 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAAAAT TAATTGCACT GGATATTGAT GGAACACTTT TGGACGATAG AGGTTACATC
CCTCAAATAA ACAGAGAGTT TTTAAAAATT GCTGTTGAAA AGTACAAAAT TGTGATAGTA
CTTTGCACAG GAAGAGGCGC TTCAGCCTTT AAAATTGCAA AAGATTTACA GCTACCATGT
TCATTAATCT CGGCAAATGG TGTTTATGTC TTCGAAAATC CTAATTTTCC ACCTATTATA
AAAAATTATC TTACAGAACG TCAGAAGAAA GTATTAATTG AGTTTCTTGA TAACAATCAT
TTTGAAATAG ACTACTATAT TGTACTGGGA TATGAACAAG ATTTTCACAT GATTTATAAA
GAGAGAACCA ATTATGATAG CTATTTTCTA AGCTTTGTAA ATGGTCGCAA ACAATTTAAA
TCTACATACC CTGCAGAAAA GCTTTTAAAG TTTTTAGAAT ACCCTATCAG TCACACTGGA
ATTGTAGGCA AATATGAAAA ACTTAAAGAG ATTAAAGAAA TCCTTAAAAC ACTTGAGTTG
GATTGTAATA TTATTCTCTA CTATGCATCA GACAACAAAG AATATGGTTT TTTAGAAGTC
TTGAGCAATA ATGCATCAAA AGAAAAAGCT CTTCTGCAAT TTATGAACTT TAAAAATATC
TCATCTGAAG AATTGATATC AATTGGTGAT AATTTCAACG ATGTCGGAAT GTTCAAAATC
TCTGGAATAA GTGTGGCAGT TGCAAATGCA CCCGAAGAAG TAAAAAAAGC TGCAAAGTTT
GTAACCTCCA GAACAAATAA TGAAGGTGCA GTTGCTGAAG CTATTGAAAT GTTTATAATA
AAAAGGGATG GGTAA
|
|---|
| Protein sequence | MIKLIALDID GTLLDDRGYI PQINREFLKI AVEKYKIVIV LCTGRGASAF KIAKDLQLPC
SLISANGVYV FENPNFPPII KNYLTERQKK VLIEFLDNNH FEIDYYIVLG YEQDFHMIYK
ERTNYDSYFL SFVNGRKQFK STYPAEKLLK FLEYPISHTG IVGKYEKLKE IKEILKTLEL
DCNIILYYAS DNKEYGFLEV LSNNASKEKA LLQFMNFKNI SSEELISIGD NFNDVGMFKI
SGISVAVANA PEEVKKAAKF VTSRTNNEGA VAEAIEMFII KRDG
|
|---|
| |