Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1047 |
Symbol | |
ID | 7409604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1141898 |
End bp | 1142563 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643715413 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_002572921 |
Protein GI | 222529039 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000178019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAGATAA AGATTGCGCC GTCTATTTTA TCTTCTAATT TTGCAGATTT GAAAAATGAA CTTAAAAAAC TTGAGTTAGC TAAAGCTGAT TTGGTCCATA TAGATGTTAT GGATGGAAAC TTTGTAGACA ATATCACAAT TGGTGCTCCC GTGGTAAGCA GTCTCAGAAA AAATTCAACA CTTTTTTTTG ATGTACATCT AATGGTTTTA CATCCTGAAA AGCATATTGA AAAATTTGTC CAAAGCGGTG CTGATAATAT TACAGTTCAC GCAGAGGTAA CCTACCACTT GGATGCCCTC ATCAGTAAAA TAAAAAGTTT TGGCAAAAAA GCAAGTGTTG CGCTAAATCC TGCAACGCCT GTATACATGA TAGAAAATGT TCTTGAAATT GTTGATATGG TTTTAGTTAT GACTGTAAAT CCTGGATATG GAGGACAAAA ATTTATACCA TATACCCTAA AAAAGATTGA AATGTTGGCA AACCTCAGAG AAAAGGAAGG ACTTTCGTTT GAGATAGAAG TTGACGGTGG TATTAATGAA GAGACCATTA TTGATTGTGT AAACGCAGGT GCAAACGTGA TAGTTGCAGG TTCATATGTA TTTGACAGTG GTGATGTTTC AAAATCTATT GAAGTTTTGA GAAGTAAGGT CCAGAGTTTG AGGTAA
|
Protein sequence | MQIKIAPSIL SSNFADLKNE LKKLELAKAD LVHIDVMDGN FVDNITIGAP VVSSLRKNST LFFDVHLMVL HPEKHIEKFV QSGADNITVH AEVTYHLDAL ISKIKSFGKK ASVALNPATP VYMIENVLEI VDMVLVMTVN PGYGGQKFIP YTLKKIEMLA NLREKEGLSF EIEVDGGINE ETIIDCVNAG ANVIVAGSYV FDSGDVSKSI EVLRSKVQSL R
|
| |