Gene Athe_1039 details

Gene Information

• Locus tag: Athe_1039
• Symbol: def
• ID: 7409596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerocellum thermophilum DSM 6725
• Kingdom: Bacteria
• Replicon accession: NC_012034
• Strand: +
• Start bp: 1133816
• End bp: 1134316
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643715405
• Product: peptide deformylase
• Protein accession: YP_002572913
• Protein GI: 222529031
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTGA GAAAGATAAG AACATATGAA GATGAGATAC TGCGCAAAAA ATCGAAGGTT 
GTTGAGAAAT TTGACCAGCG ACTTTGCCAG CTTCTTGACG ATATGAAAGA CACCATGTAT 
GAAGCAAACG GCATTGGTCT TGCAGCGCCG CAGGTGGGAG TACTCAAAAG AGCAGTTGTG 
ATTGATATAG GAGAAGGAGC AATTGAACTT GTCAATCCCG AAATAGAACA AGTAGAAGGA 
AGTGCTGTGG ATGTAGAAGG TTGTCTTTCT GTCCCAAACG TGTGGGGTGA GGTGGAAAGA 
CCACAGAAAG TGGTAGTAAA AGCTCAGGAT AGGTTTGGAA ATGAGTTTAG ACTTGAAGCA 
GAGGGGCTTT TAGCAAGGGC TGTGTGTCAT GAGATAGATC ATCTTGATGG TATTTTGTTT 
GTTGACAAGG TTATACGATT TGTATCTGAA GAGGAGATCG AGCAAAGGCG CTCAAGAGGC 
GATAAGATGG ATTTAGAATA A 

 

Protein sequence

MALRKIRTYE DEILRKKSKV VEKFDQRLCQ LLDDMKDTMY EANGIGLAAP QVGVLKRAVV 
IDIGEGAIEL VNPEIEQVEG SAVDVEGCLS VPNVWGEVER PQKVVVKAQD RFGNEFRLEA 
EGLLARAVCH EIDHLDGILF VDKVIRFVSE EEIEQRRSRG DKMDLE