| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1018 |
|---|
| Symbol | |
|---|
| ID | 7407920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1113867 |
|---|
| End bp | 1114799 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643715383 |
|---|
| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
|---|
| Protein accession | YP_002572892 |
|---|
| Protein GI | 222529010 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGT CAGAAACAAG ACAGTTTGCC AAGGTACAAA GCCAGCTTTT AATTGTCGAC
AACCTGAAGC TTGTGTATCA TGTTGCAAAT AAATTTATGC CATGTCCAAA GGGCTATTAC
TATGAAGTTG ATGACCTTGT CAGTGAAGGG TACATTGGAC TTGTTGTTGC AGCAAAGAAC
TATGACCCTG CCAAAGGCAG TTTTTCAACC TATGCTTGCA AGGTGATTGA GAGCAAGATA
AAAAGAAGCT TGCCAAAATA CAAGTTATCT TGTGCCATCT CTTTGGACAG TCCGATATCA
AAAGAACCCG AAGAAGATAC ATCTACAGTT GCAGATATAA TCTCAGATGG TTATTCAGTC
GAAAGCGAAG TGATTAGGAA AGACACAGTC CAAAAGCTAC ATAGGTATTT TGCCATCTTA
ACCGAAGAGG AAAAAGAAAG AGTCTTATAT TACATCTCCA CAGGAAAGAA TTTACCTGCC
AGTGATAAGG TGTTCAAAAA AGCAAGAAGA AAGATAATAG CCAAGATGAG ACAAGAACAG
TTTGAGGCAG ACCTTGACGA CTTGACAGTG TTTATATCCT GCCCAGCTGT GCACATAGCA
AGTGGTAGTA ATTTTGGCTA TTCACCAGTT GAGGCAACTG TTATTGATAG AGAAGAGAAA
AGAAAACAGC TTGAGGTTTT GTCTGCAATA CCACAATTGG ACAAGCTGAG GGTTTTAAAG
CAACAAGGCG AACAGGACAG GATGAAACTT CTTGCTGCCA AGTGGGAAGT AGAAGAGTTT
ATAGAACGTA ACTGGGATAA TCTCACAGTC TACAATGTAA GACTTCTTAA AGATTACTTT
GTATTTTGTC TTTCACATCT TTCGATGGTA CAAAAGTATG GAAGCAAGTA CAGAGAACAA
TTAAAAAGAG TCATGAAAAA GATAACTGGA TAG
|
|---|
| Protein sequence | MQQSETRQFA KVQSQLLIVD NLKLVYHVAN KFMPCPKGYY YEVDDLVSEG YIGLVVAAKN
YDPAKGSFST YACKVIESKI KRSLPKYKLS CAISLDSPIS KEPEEDTSTV ADIISDGYSV
ESEVIRKDTV QKLHRYFAIL TEEEKERVLY YISTGKNLPA SDKVFKKARR KIIAKMRQEQ
FEADLDDLTV FISCPAVHIA SGSNFGYSPV EATVIDREEK RKQLEVLSAI PQLDKLRVLK
QQGEQDRMKL LAAKWEVEEF IERNWDNLTV YNVRLLKDYF VFCLSHLSMV QKYGSKYREQ
LKRVMKKITG
|
|---|
| |