Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0979 |
Symbol | spoVFB |
ID | 7407880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1079873 |
End bp | 1080469 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643715345 |
Product | dipicolinate synthase subunit B |
Protein accession | YP_002572854 |
Protein GI | 222528972 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR02852] dipicolinic acid synthetase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.750233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACTTGA ATAATCTAAA AATAGGGTTT GCTATTACAG GGTCGTTCTG TACATTTGAC CAAATAATAA CTGTAATTGA AGAACTCAAA AAACAAGGTG CAATCATAAC ACCAATATTC AGTGAAAAAG TACAGACAAC CAATACACGC TATGGAAAAG CGGATGAAGT CGTAAAGAGA ATAGTTTCTA TTTGTGGAAA CCCGCCAATA ACAAATATTG TAGAAGCAGA GCCTGTCGGT CCTAAAAAAC TTTTTGATGT ACTGGTTGTT GCACCTGCAA CAGGGAACTT TATCGCCAAG CTTGCAAACG GAATTGTTGA TGAAACTCCT GTTATGTGCA CAAAAGCGCA CCTTAGGAAT CAAAGACCGG TGGTTGTTGC GATATCTACA AACGATGCGC TTGGTCTTAA CTGCAAAAAT ATTGCCATTC TTCTTAACAC AAAAAATATC TACTTTGTCC CATTTAGGCA GGATGACCCT TTGGCAAAGC CAAATTCACT TGTTGCAGAA TACACTCTTC TCATTCCCAC AATAATTGAA GCACTTTCTG GCAGGCAAAT TCAGCCGCTT TTGCTTTGTC CTGGTGCAAA AAAGTGA
|
Protein sequence | MDLNNLKIGF AITGSFCTFD QIITVIEELK KQGAIITPIF SEKVQTTNTR YGKADEVVKR IVSICGNPPI TNIVEAEPVG PKKLFDVLVV APATGNFIAK LANGIVDETP VMCTKAHLRN QRPVVVAIST NDALGLNCKN IAILLNTKNI YFVPFRQDDP LAKPNSLVAE YTLLIPTIIE ALSGRQIQPL LLCPGAKK
|
| |