| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0804 |
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| Symbol | rpoB |
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| ID | 7407991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | + |
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| Start bp | 895636 |
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| End bp | 899322 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643715182 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002572692 |
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| Protein GI | 222528810 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0442499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCACTAC CTCGTCCTGT GCAATATGGC AAAGTTCAAA GAATGAGTTA TGGTAAGGTT
AAGGAAGTTC TGGATTTGCC ATATCTTTTG GAAATCCAGA AAAAATCATT TCAATGGTTC
TTAGATGAAG GGCTGAGAGA GGTTTTAAGA GAAATATCTC CGATTAAAGA TTACAGTGAG
ACCTTGCTTT TGGAGTTTGT AGACTATTAT TTTGACGGAC CACCTAAGTA TTCTGAACAA
GAATGTAAGG AAAGAGACGC CACATATGCA AGACCTCTAA AGGTAAAGGT CAGACTTATA
AACAAAGAAA CAGGTGAGAT AAAAGAACAG GACATTTATA TGGGCGAATT CCCAATTATG
ACCGAAACTG GAACATTTAT CATCAACGGT GCGGAAAGAG TAATTGTAAG CCAGCTCATC
CGTTCACCCG GGTGTTATTT TGCATCTTCC ATTGATAAGC AAGGAAGAAA AATATTTTCA
GGAACTCTCA TTCCAAACAG AGGTGCATGG CTTGAATTCG AAACTGATGC AAGCGAGCTT
TTGTCTGTCA GACTTGACAG AACAAGGAAG GTCTCTCTCA CAACCCTGTT AAAGGCGTTT
GGACTTTACA ATCAGCAGCT GATATTTGAA AAGTTTGGCG AGGATGAGAG ACTGAAAGCT
TCGCTTGAGA AAGAAGCAAA TAAAGGTGAG CTTGGAAATC CAGTTGAGAA TGCACTTTTA
GAGGTATATA GAAGACTTAG ACCTGGTGAG CCACCAAATG TTGAGAATGC TCGAAATCTT
CTTTATAGTA TGTTCTTTGA CCCAAGAAGG TATGATTTAG CAAAAGTGGG AAGATATAAA
TTCAATAAAA AATTGTCGTT ATGGAAGAGA ATTTTCAATA AAAGAGCAGC TCAGGATGTA
GTTGATCCCA AGACTGGTGA GATATTAGTA AAAGAAGGAG AACTGATTAC AAGAGAGATT
GCTACCCAAA TTCAGGATGC TGGCGTTAAC GAGGTATGGG TTTATGCAGA TGAAGAGAGA
CCATTTAAGG TTGTGGGGAA CAACACAGTA AAACTTGACA GATATGTAGA ATTTGATGTG
TCTGACATTA ACATAAAAGA ACTTGTTTAT AGGCCTGTTT TGGATGATAT TCTTAATACT
ACAAATGATG TTCTTGAGAT TAAAAGACTC ATAAAAGAAA GAGAGAGAGA ACTTGTTCCA
TATTGCCTTA CAATAGATGA TATATTTGCA GCAACAAGCT ACTTTTTGGG TCTCAAATAT
GGCATAGGTA CAACTGATGA TATTGACCAT TTGGGCAACA GAAGGGTCAG AGCTGTAGGC
GAACTTTTAC AAAACCAGTT TAGAATTGGT CTTGCACGAA TGGAAAGAGT TATTCGGGAG
AGAATGAACA TACACGATAT TGATACTGTA ACTCCTCAGA CGCTAATAAA CATAAGACCG
GTTACAGCAG CTATCAAGGA GTTTTTTGGT TCAAGCCCGC TATCACAATT TATGGACCAG
GTAAATCCAC TTGCAGCACT TACAAACAAG AGAAGGCTTT CTGCTTTGGG ACCAGGTGGA
CTTTCCAGAG ACAGAGCTGG GTTTGAGGTC AGGGACGTAC ATCATTCTCA TTATGGAAGG
ATGTGCCCTA TCGAGACGCC AGAAGGGCCA AACATTGGTC TTATTACTTC TTTAGCAACA
TATGCAAGGG TTAACGAGTA CGGATTTTTA GAGACACCTT ACAGAAAGGT GGACAAGAAA
GAAGCAAGGG TGACAAACGA GGTTGTGTAT CTTACAGCTG ATGAGGAAGA CACTTACAAG
ATTGCTCAGG CAACAGAACC TGTTGACGAA GAGGGAAGGT TTATAAACCA GAGGGTTACA
GTAAGGTTTG GCGAGGAAAT TATAGAAGTT GACAAACATG AGGTTGACCT TATAGATATA
TCACCTAAAC AGATTGTATC AGTTTCAACA TCACTTATTC CGTTTTTAGA AAACGACGAC
GCAAACAGGG CACTTATGGG TTCTAACATG CAGCGCCAGG CAGTACCACT TTTGATGACA
GAGTCTCCGA TAATTGGAAC AGGAGTTGAA TACAGGGCTG CGGTTGACTC TGGTGTATGT
ATTCTTGCAA AGAAAGATGG TGTTGTTGAA AATGTATCTG CTGATGAGAT TGTTATAAGA
AACAATGATG GAACAAAAGA TGTATATCAT CTTTTGAAGT TCAAAAGGAC AAACCAGGGG
ACATGTTTTA ACCAAAGACC AATTGTAAGA AAAGGACAAG AGGTTAAAGC TGGAGAGGTT
ATTGCAGACG GACCTTCCAC AGACCATGGT GAACTTGCAC TTGGCAAAAA CGTCCTTGTT
GCTTTCATGC CATGGGAAGG GTACAACTAC GAGGACGCTA TCTTGATTTC AGAAAGGCTT
GTAAAAGAGG ATGTTTATAC CTCTATTCAC ATAGAAGAAT ATGAGTGTGA GGCAAGAGAT
ACAAAACTTG GACCTGAGGA GATAACAAGA GATATTCCAA ATGTTGGCGA AGATGCAATA
AAAGATTTGG ATGAGAGAGG AATTATAAGA ATCGGTGCCG AAGTAAAAAG TGGTGATATT
TTGGTTGGGA AAGTTACTCC CAAAGGTGAG ACAGAGCTTA CTGCAGAAGA GAGATTGCTT
CGTGCTATAT TTGGTGAAAA GGCAAGAGAA ACAAGAGATA CTTCATTGAG AGTACCACAT
GGCGAAGGCG GAATAGTTGT AGATGTAAAA GTATTTTCGC GCGACAAAGG AGATGAACTT
CCACCTGGTG TAAACCAGCT TGTGAGAGTT TATGTTGCTC AAAAAAGAAA AATCTCAGTT
GGTGACAAGA TGGCAGGCCG CCATGGTAAC AAAGGTGTTA TTTCAAGAAT TCTTCCTGTT
GAAGATATGC CTTTTTTACC TGATGGTACA CCTGTTGACA TAGTTCTAAA TCCTCTTGGT
GTGCCGTCGC GTATGAACAT TGGACAGATT TTGGAGACTC ACCTTGGGTA TGCGGCAAAA
GCGCTTGGAT GGAAGGTTGC AACACCTGTT TTTGACGGTG CAAAAGAGGA AGATATCGAA
GAGGCATTAA AACTTGCAGG ATTAAATCCT ACAGGTAAGA CAATCTTATA TGATGGCAGA
ACTGGTGAAC CATTTGACAA TGAAGTAACT GTTGGTTACA TGTACATGCT AAAGCTTGTG
CACCTTGTTG ACGATAAAAT TCACGCACGA TCCACAGGAC CGTATTCGTT GGTTACACAG
CAGCCTCTTG GTGGTAAAGC TCAGTTCGGT GGTCAGCGAT TTGGTGAGAT GGAGGTTTGG
GCGCTTGAAG CGTACGGTGC TGCATATACG CTGCAAGAGC TTTTGACTGT AAAATCTGAC
GATGTAACAG GAAGGGTCAA GACATATGAA GCTATAGTAA AAGGAGAAAA TATCCCAGAA
CCAGGAATTC CTGAGTCTTT CAAGGTGCTT GTGAAGGAGC TCCAGAGCCT GTGCTTGGAT
GTAAAGCTTT TGTCTGAGGA CAACAAGGAG ATTGAGCTAA AAGAGTCTGT TGATGAAGAT
GAGCAGCCAC AAGGGCTTGG AGCTTTTGAG ATAGGCGGCG ATGAAATAGA GGAGGATAAA
GAAGACGACA AGGAAAAGTT TTATGAGGAT TTGATGAATG CAACACAAGA AGACGACCAG
GGCGAGATAG ATGATATAGA CGAGTAA
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| Protein sequence | MALPRPVQYG KVQRMSYGKV KEVLDLPYLL EIQKKSFQWF LDEGLREVLR EISPIKDYSE
TLLLEFVDYY FDGPPKYSEQ ECKERDATYA RPLKVKVRLI NKETGEIKEQ DIYMGEFPIM
TETGTFIING AERVIVSQLI RSPGCYFASS IDKQGRKIFS GTLIPNRGAW LEFETDASEL
LSVRLDRTRK VSLTTLLKAF GLYNQQLIFE KFGEDERLKA SLEKEANKGE LGNPVENALL
EVYRRLRPGE PPNVENARNL LYSMFFDPRR YDLAKVGRYK FNKKLSLWKR IFNKRAAQDV
VDPKTGEILV KEGELITREI ATQIQDAGVN EVWVYADEER PFKVVGNNTV KLDRYVEFDV
SDINIKELVY RPVLDDILNT TNDVLEIKRL IKERERELVP YCLTIDDIFA ATSYFLGLKY
GIGTTDDIDH LGNRRVRAVG ELLQNQFRIG LARMERVIRE RMNIHDIDTV TPQTLINIRP
VTAAIKEFFG SSPLSQFMDQ VNPLAALTNK RRLSALGPGG LSRDRAGFEV RDVHHSHYGR
MCPIETPEGP NIGLITSLAT YARVNEYGFL ETPYRKVDKK EARVTNEVVY LTADEEDTYK
IAQATEPVDE EGRFINQRVT VRFGEEIIEV DKHEVDLIDI SPKQIVSVST SLIPFLENDD
ANRALMGSNM QRQAVPLLMT ESPIIGTGVE YRAAVDSGVC ILAKKDGVVE NVSADEIVIR
NNDGTKDVYH LLKFKRTNQG TCFNQRPIVR KGQEVKAGEV IADGPSTDHG ELALGKNVLV
AFMPWEGYNY EDAILISERL VKEDVYTSIH IEEYECEARD TKLGPEEITR DIPNVGEDAI
KDLDERGIIR IGAEVKSGDI LVGKVTPKGE TELTAEERLL RAIFGEKARE TRDTSLRVPH
GEGGIVVDVK VFSRDKGDEL PPGVNQLVRV YVAQKRKISV GDKMAGRHGN KGVISRILPV
EDMPFLPDGT PVDIVLNPLG VPSRMNIGQI LETHLGYAAK ALGWKVATPV FDGAKEEDIE
EALKLAGLNP TGKTILYDGR TGEPFDNEVT VGYMYMLKLV HLVDDKIHAR STGPYSLVTQ
QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT LQELLTVKSD DVTGRVKTYE AIVKGENIPE
PGIPESFKVL VKELQSLCLD VKLLSEDNKE IELKESVDED EQPQGLGAFE IGGDEIEEDK
EDDKEKFYED LMNATQEDDQ GEIDDIDE
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