Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0790 |
Symbol | |
ID | 7407977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 880710 |
End bp | 882011 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643715168 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002572678 |
Protein GI | 222528796 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000940034 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTAA GATATAATCT TGAAGTTTCA CCAAAAGGTA ATCTTTCATG GGAAGGAATT GACCTTCTTG ACTTGATAGA GATGTATGGA ACTCCTCTTT ATGTTATGAA TGAGACAATG ATAAGAGAAA ATATCAATAT ATTTAAGACT TCCCTGAATA AATATTTTGG AGAAAATGGT CTTATAATTT ATGCATCAAA AGCTTTTTGC ACAAAGGCTA TGTGCCAAAT AGCAAAAGAG GAAGGAATTG GCCTTGATGT TGTATCAGGG GGGGAACTTT ACACAGCACT TTCTGTAAAT TTTGACCCAG ATAAGATATT CTTCCATGGA AATAATAAAA CATATGATGA GCTTGAGATG GCAGTTGAAA AGGGTGTAAA GATTGTACTT GATAATTTTG ATGAGCTCGA GATGCTAAGT CTGATATGTA GAACAAAAAA CAAAAAAGCA GATGTTTTGA TTCGAATAAA ACCAGGAATA GAAGCTCATA CACATGAGTT TATTAGGACA GGGCAGATAG ACTCAAAGTT TGGGGTTGCG CTTGAAAATG GCGAAGCATT CTCTATTGTT CAAAAAGTTT TGCAAAAAGA GGAGCTAAAC TTGGTAGGTC TTCATTGCCA TATTGGCTCA CAGATTTTCG AAACAGCTCC GTTTAAGCTT GCTGCAAGGG TCATGCTTGA GTTTATGCTC AAGATTAAAA ATGAACTTGG CTATGAGATA AAAATATTAG ATTTAGGGGG CGGATTTGGA ATAAAATACA CCGCTCATGA TGAACCACCA AGAGTTGAAA AGTTTATAGA AGTAATTACT GAAGAGGTAG AAGAATTTTG TAGCTTAAAG GGGCTAAAAA AACCGTTTAT TGTTTTAGAA CCTGGAAGGT CAATTGTGGG TGAAGCTGGA ATTACGCTTT ATACAATTGG AAATGTCAAA GAAATACCAA ATGTTAGAAA CTATGTATCT GTTGATGGTG GAATGACAGA CAATCCACGA TATGCGCTGT ATCAGGCAAG ATATGATGCA TATGTTGTTG AAAATCCTTT GGGGCAGCGG ACAAAAGTTT ATACAATAGC GGGAAGATGC TGTGAGTCTG GTGATATACT CATCAAAGAC ATAAAGCTTC CAGAGCTTAA GACTGGTCAA CATCTTGCCA TTTTGGCAAC AGGAGCATAT AATTATTCTA TGTCAAGCAA CTACAATAGG TTCCCAAGAC CTGCAGTTGT ACTTTTGAAA AATGGTCAAG CAAGGGTTAT TGTAAAACGT GAAACATATG AAGACCTTGT GAAAAATGAT ATGGAGATTT AA
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Protein sequence | MQLRYNLEVS PKGNLSWEGI DLLDLIEMYG TPLYVMNETM IRENINIFKT SLNKYFGENG LIIYASKAFC TKAMCQIAKE EGIGLDVVSG GELYTALSVN FDPDKIFFHG NNKTYDELEM AVEKGVKIVL DNFDELEMLS LICRTKNKKA DVLIRIKPGI EAHTHEFIRT GQIDSKFGVA LENGEAFSIV QKVLQKEELN LVGLHCHIGS QIFETAPFKL AARVMLEFML KIKNELGYEI KILDLGGGFG IKYTAHDEPP RVEKFIEVIT EEVEEFCSLK GLKKPFIVLE PGRSIVGEAG ITLYTIGNVK EIPNVRNYVS VDGGMTDNPR YALYQARYDA YVVENPLGQR TKVYTIAGRC CESGDILIKD IKLPELKTGQ HLAILATGAY NYSMSSNYNR FPRPAVVLLK NGQARVIVKR ETYEDLVKND MEI
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