Gene Athe_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0788 
Symbol 
ID7407975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp878076 
End bp878843 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content35% 
IMG OID643715166 
Productsporulation sigma factor SigG 
Protein accessionYP_002572676 
Protein GI222528794 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.667987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAAAG TAGAAATTTG TGGTGTGAAT ACATCAACAC TCCCCGTTTT AAGCCATGAA 
GAAAAGCTTG AACTTTTGAA AAGAATGAAA GAAGGAGACA AAGAAGCACG AAGAATTTTT
ATTGAAGGAA ATTTGAGGCT TGTTTTGAGC GTTGTACAAA AATTTGCAAA CAGGGGCGAG
AATTTAGACG ATTTGTTCCA GGTAGGATGC ATTGGTCTTA TAAAGGCAAT TGATAATTTT
GACCTTTCTC AGAATGTAAA GTTTTCGACT TATGCGGTGC CGATGATAAT CGGGGAGATA
AGAAGATATC TGAGGGATAA TAACTCTATG AGAATTTCGA GGTCTTTGAA AGATACAGCC
TATAAAGCTT TAAAAATAAA GGAAAAGTAT ATAAATAATA ACCAGAAAGA ACCAACATTA
GAAGAGATAG CAAAAGAGCT ATCAATAACC AAAGAAGATC TTGTTTTTGC GCTTGATTCT
ATACAAGAAC CAATCTCTCT TTATGAGCCA GTGTTTCAAG ATAGTACTGA TACAATGTAT
GTTGTGGAAA GACTGTGCGA CCACAAATCA TGCGAAAGTG TTTGGCTTGA GGAGATTTCA
CTCAAAGATG CTCTCTCGAA ACTTACAAAG CGCGAAAAAG AAATTCTGTA TTTGCGTTAT
TATAAAGGAA AAACCCAAAT GGAGGTAGCA AAAATTGTAG GAATTTCTCA AGCACAGGTC
TCAAGAATTG AAAAAAGTGC AATAGGACAT ATTAAAAAGT ATATTTAA
 
Protein sequence
MNKVEICGVN TSTLPVLSHE EKLELLKRMK EGDKEARRIF IEGNLRLVLS VVQKFANRGE 
NLDDLFQVGC IGLIKAIDNF DLSQNVKFST YAVPMIIGEI RRYLRDNNSM RISRSLKDTA
YKALKIKEKY INNNQKEPTL EEIAKELSIT KEDLVFALDS IQEPISLYEP VFQDSTDTMY
VVERLCDHKS CESVWLEEIS LKDALSKLTK REKEILYLRY YKGKTQMEVA KIVGISQAQV
SRIEKSAIGH IKKYI