Gene Athe_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0625 
SymbolsecD 
ID7406966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp709214 
End bp710461 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content39% 
IMG OID643715006 
Productpreprotein translocase subunit SecD 
Protein accessionYP_002572522 
Protein GI222528640 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000418015 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATA AAAGCTTAGC AAAGTTTCTG ATAGGATGCT TAGTAATAGC CTTTGCATTT 
TACATAGTGT TTTTTGGGCT GGAAATTGGA ACTGCAAGCA TCCCGTCAGT CCAAAAAGTT
ATAAGGTATG GGCTTGATTT GAAAGGCGGC GTTTACATTG TATATGAGGC AGCAAAAGAG
AATCCAACAA GAAGAGAAAT GGAATCAGCG TTGCAGCTTA TCAGAACAAG GCTTGACATG
AGAAACTTTT ATGATGCAAC GGCGACAATT CAGGGGTCAA AGAGAATAAG GGTAGAAATT
CCGGGTGTCA AAGACCCTGA TGAAGCTATA CAATATATAG GAAGAACAGC TTTGATTGAG
TTCAAGGGAC CTTCTGGAGA TTTGATTGTT TCAGGTAGAA ACGTTGTTGA TGCATATGCA
CAGCAGACAA CATCAGGATA CGTTGTTGCA CTAAAGTTTG ACAAAGAGGG AACAAAAAAG
TTTGCAGAAG GGACAAAAAA ATATTTGGGT CAGAACATTG GAATTTATCT TGATGGCAAG
CTCATTTCAA ATCCTGTTGT TAGAGCAGAG ATTGACAATG GTGAAGCTGT GATTGAAGGT
ATGAAAGATC TGGAAGAGGC TAAAACACTT GCTCAGCAGA TAAAAGCTGG TGCACTGCCA
TTTGCTTTGA ATGTGATAGA GAGCAAGGCT ATAGGACCTT CACTTGGAAA TGAGGCTTTT
AAATCAACTT TAAAGGCTGG AATTATTGGA ATCTTGCTTG TGTTCCTGTT CATGATAATT
TTCTACAGAC TGCCAGGGCT TGTTGCAGAT ATAGCTTTAG TTGCTTATAT AGTTATTCTG
GTTGCAATTG TGGGGTATGC AAAGATAACT TTGACCCTCC CTGGTATAGC AGGTATAATT
CTGTCTGCCG GCATGGCAGT TGATGCGAAT ATCTTGATCT TTGCAAGATT AAAAGAGGAG
CTGAGAAGTG GAAAGACATT AAGAGCTGCT ATGGATGCAG GTTTTAAAAG AGCGCTTAAT
GCTGTTATTG ACTCTAACGT GACAACGATA ATAGCAGGAA TTGTTCTTTT GTTCTTAGGA
ACAGGTCCTA TTAAAGGTTT TGCATGGACG CTCACAATTG GTATTGTGGT ATCGTTCTTC
ACAGCAATCA CTGTTACAAG ATTTTTGCTT ACTTCAATTA TAAATACAGG ACTTTTCAAA
GATATCAGGT GGTATGGCGG TAAGAAAACC AGGGAGGTGG ATGCTTAA
 
Protein sequence
MQNKSLAKFL IGCLVIAFAF YIVFFGLEIG TASIPSVQKV IRYGLDLKGG VYIVYEAAKE 
NPTRREMESA LQLIRTRLDM RNFYDATATI QGSKRIRVEI PGVKDPDEAI QYIGRTALIE
FKGPSGDLIV SGRNVVDAYA QQTTSGYVVA LKFDKEGTKK FAEGTKKYLG QNIGIYLDGK
LISNPVVRAE IDNGEAVIEG MKDLEEAKTL AQQIKAGALP FALNVIESKA IGPSLGNEAF
KSTLKAGIIG ILLVFLFMII FYRLPGLVAD IALVAYIVIL VAIVGYAKIT LTLPGIAGII
LSAGMAVDAN ILIFARLKEE LRSGKTLRAA MDAGFKRALN AVIDSNVTTI IAGIVLLFLG
TGPIKGFAWT LTIGIVVSFF TAITVTRFLL TSIINTGLFK DIRWYGGKKT REVDA