Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0571 |
Symbol | |
ID | 7406912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 644008 |
End bp | 644790 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643714954 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002572470 |
Protein GI | 222528588 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000639441 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTATTG GGAAAATATC TGATATGATT TTGAAATACA GTGGCAAAAT CATATACTCT GTGGTCATCC TAATTATTGG TTTTTTATTT TTGAAAGTTT CTAATAGAAT GCTTGAAAAA TGGAAGAAAA AACAGAGAAG TTCTGTATTT CCTATAAATC AAAAAAGAAT AGATACTCTT GCAGCACTTT TCAAAAGTAT TTTAAAATAC TCTATATACT TTTTAGTGAT TGTGCTCATT CTTGAAAACT TTAACGTTTC AATCAAGACA ATCTTGGCTG TTGCAGGGAT AGGTGGACTT GCGATAGGTT TTGGTGCACA GAGTTTGATT AAAGATGTCA TAGCAGGTCT TTTTTTAATT ATAGAAGACC AGCTTTCTGT CGGTGATTAT GTGACTATCG ATGGAAGAAG CGGCACTGTA AAAGAAATGG GAATAAAGAC AATAATAATC CAGGACTACA ACGGCTCAAT CCATATTATT CCAAATGGTT CCATAGGTGC CATTACAAAC TGGTCGAGGC ATAACTCAAA GGCGATTGTG GATGTTAAGC TTAATACAAA AATGAACTTT GATGAGGTGT CTTTGAAGCT ACAAGAGGTT TTTAAAGAGA TTGAAGAGGA GTTCAAAGAT GATATTGTAA CACCACCACA AATTGTAGGG ATTGTGGATA CAAACTGGAT AGAATATACA CTCAGGATTG TGACAGAGAC AAAACCTCTT CGCCACTGGG ATTTAGAGAG GGCGATGAGA AAAAAGATTA TTGAAAAACT TTTTATAAGC TAA
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Protein sequence | MSIGKISDMI LKYSGKIIYS VVILIIGFLF LKVSNRMLEK WKKKQRSSVF PINQKRIDTL AALFKSILKY SIYFLVIVLI LENFNVSIKT ILAVAGIGGL AIGFGAQSLI KDVIAGLFLI IEDQLSVGDY VTIDGRSGTV KEMGIKTIII QDYNGSIHII PNGSIGAITN WSRHNSKAIV DVKLNTKMNF DEVSLKLQEV FKEIEEEFKD DIVTPPQIVG IVDTNWIEYT LRIVTETKPL RHWDLERAMR KKIIEKLFIS
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