Gene Athe_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0523 
Symbol 
ID7408647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp589702 
End bp590874 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content37% 
IMG OID643714905 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002572422 
Protein GI222528540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0215267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TAACCTTAAA GAATCTGGTT GGTATTACGG TAGTTTTGGT TTTATTAATT 
TCTCTTTTTA CCAGTGCCGA ATCTTCAAAT ACAAAAACTA TTCGACTTGG TGTGAATCTT
GAACTATCAG GCAGTGTTGC ACAGTTTGGG CAGAGAAATT TGGAAGGACT TAAAATGGCA
ATTGAAGAAA TAAACAGCAA GGGTGGAGTT TTAGGCAAAA AAATTGAACT TGTGATTTAC
GACAACAAAT CAGACAAGAC AGAAGCATTG AATGTTGCCA CAAAACTTGC TACAAAAGAA
AATGTTTTTG CAATGTTAGG ACCAGTTACG TCAGGTGCAA CAAAATCAGC CTCTGTTGCT
GCGCAGCGTT ATAAAGTACC TCTAATTTCT TCTACAGCAA CAGATGACCT TGTCACAGTA
GATGAGCGAA CAGGTAGAAC AAAAGCGTAC ATTTTCAGAA TTTGTTTTAA TGACTCATTT
CAGGGCAGTG TGATGGCAAA CTTTGCTCTA AAGACGTTAA AAATCAAAAC TGCAGCTGTG
ATATACGATG CATCTTCGGA TTACAGCAAA GGTCTTTATA AGAATTTCAA AGAGGCATTT
ACAAAAGGTG GAGGGAAGCT TGTAGCTGAA GAAGCATTTT CGAAAGGTGA ACAAGATTTT
AATGGAATTT TGACAAAAAT AAGAGACAAA AAACCGCAAG CTATTTTTGC CCCTGTATAC
TACGATGAAG CAGGACTTAT CATCAAACAG GCAAGAGAGC TTGGAATGTG GATACCTATT
TTGGGTTCTG ACGGGTTTGA CGACCCGAAA GTTATAGAAA AAGCAGGCAG CAAATATGCA
ACAAATGTAT TTTTCTCAAC ACATTATTCC TCTCAGGACA CAGATAAAAA AGTGCAGGAT
TTTAGAAAAA GATACCAGCA AAAGTATAAG ATTGAACCTA ACGCGCTTTC AGCACTGGGT
TATGATTTGG GTTATTTCAT TGCAGATGCA ATAAAAAGAG CGAATTCTAC AACAGACAGA
GAAAAACTTC GCAAAGCACT TGAAATCACC AAGAACTTTG AGGGTGTTAC TGGAATTATC
TCAATAGATG CAAAACATAA TGCAAAGAAG TCTGCGGTTA TAATCGAGAT AAAAAATGGT
GTTCAGAGAT TTAAACAAAA ACTAAATCCT TAA
 
Protein sequence
MKRLTLKNLV GITVVLVLLI SLFTSAESSN TKTIRLGVNL ELSGSVAQFG QRNLEGLKMA 
IEEINSKGGV LGKKIELVIY DNKSDKTEAL NVATKLATKE NVFAMLGPVT SGATKSASVA
AQRYKVPLIS STATDDLVTV DERTGRTKAY IFRICFNDSF QGSVMANFAL KTLKIKTAAV
IYDASSDYSK GLYKNFKEAF TKGGGKLVAE EAFSKGEQDF NGILTKIRDK KPQAIFAPVY
YDEAGLIIKQ ARELGMWIPI LGSDGFDDPK VIEKAGSKYA TNVFFSTHYS SQDTDKKVQD
FRKRYQQKYK IEPNALSALG YDLGYFIADA IKRANSTTDR EKLRKALEIT KNFEGVTGII
SIDAKHNAKK SAVIIEIKNG VQRFKQKLNP