| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0474 |
|---|
| Symbol | aspA |
|---|
| ID | 7407553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 544462 |
|---|
| End bp | 545847 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643714862 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_002572379 |
|---|
| Protein GI | 222528497 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.180708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAA TAGAAAAAGA TTTCTTGGGC AGTATTGAGC TTTCTGACCT TGAGCTTTAT
GGAATTCACA CAAAACGCGC TTTTGCTAAT TTCAATGTTT CTGGAAAGAG CGTTGACAAA
GATTTAATAA AATCGCTTGT CATGGTCAAA AAAGCGTGCG CAATTGCAAA TTATGAAGTT
GGTCTTTTGG ATGAAAAAAT TAAAGATGCT ATTGTCTTTG CATGTGACGA AATTCTGGCA
GGAAAATATG ATGACCAGTT CATTGTAGAC AGATTCCAGG GCGGTGCGGG AACATCTACA
AATATGAATG TAAACGAAGT TATTGCAAAC GTAGCCTTAA TTCACATTGG AAGAAAACCG
GGTGAGTATG ACATAATTCA TCCAATCAAC CATGTTAATA TGTCACAGTC AACAAACGAT
GTGTACCCTA CAGCCTTGCG AATTGCCACT ATATGGAATG TAAGAGAACT TTCAGAAGAA
TGTGCAGAGC TTCAAAAAAG CCTTCAGAAA AAAGAGCATG AATTTGAAGA TGTAATCAAG
GCAGGAAGAA CACAGCTGCA GGATGCCCTG CCTGTAACAC TTGGTCAGGA GTTTGGTGCA
TATGCCCAAG CTATCTCACG CGACAGATGG AGACTATACA AGGTTGAAGA GCGGCTAAGA
GTGGTCAATC TTGGTGCAAC TGCTGTTGGC ACAGGAGTAA ACGCACCTTT GAAATACATT
TTTAAGGTGA TAGAAATATT AAGAACTTTA ACCAAAATCG GCTTGGCTCG TTCAGACTAT
CTTATGGACG CAACACAGAA CGCAGACGTT TTTGTTGAAT GCTCTGGGCT TTTGAAAGCA
TTAGCAGTAA ATCTCTCAAA AATTGCAAAT GATCTTCGTC TTCTTTCCTC TGGCCCAAAC
ACGGGCTTTA ATGAGATAAA CCTGCCAGCT GTTCAGGCAG GTTCAAGTAT TATGCCAGGA
AAGGTAAATC CTGTTATACC AGAGCTTATA AACACAGTAG CTTTTCAGGT GATGGCAAAT
GACTTTGCGA TAACTTTAGC AGCACAAGCT GGTCAGCTTG AGCTGAATGC TTTTTTACCT
CTGATAGCAA ACAATCTTCT TGAAAGTCTT AAAATTCTCA AAAACGGTAT TAAAATTTTC
AGGCAGCAGT GTATAGATGG TATAACAGCA AACAAAGAAA AATGTTTAGA GTATGCAAAA
AAGACTCCTG CTATTGCAGC AAGCTTAATT GACAGGATTG GATATGACAA GGCAGCAGAA
ATTGCAAAAA AGGCTATTCT TGAGAACAAA CAGATAATTG ATGTTGTCAA AGAGCTAAAT
ATTATGGATG AAAAAGAAGC ACAAGAGCTT TTGAATCCTT TTGAGTTTAT AAAGTTTAAA
GAATGA
|
|---|
| Protein sequence | MSRIEKDFLG SIELSDLELY GIHTKRAFAN FNVSGKSVDK DLIKSLVMVK KACAIANYEV
GLLDEKIKDA IVFACDEILA GKYDDQFIVD RFQGGAGTST NMNVNEVIAN VALIHIGRKP
GEYDIIHPIN HVNMSQSTND VYPTALRIAT IWNVRELSEE CAELQKSLQK KEHEFEDVIK
AGRTQLQDAL PVTLGQEFGA YAQAISRDRW RLYKVEERLR VVNLGATAVG TGVNAPLKYI
FKVIEILRTL TKIGLARSDY LMDATQNADV FVECSGLLKA LAVNLSKIAN DLRLLSSGPN
TGFNEINLPA VQAGSSIMPG KVNPVIPELI NTVAFQVMAN DFAITLAAQA GQLELNAFLP
LIANNLLESL KILKNGIKIF RQQCIDGITA NKEKCLEYAK KTPAIAASLI DRIGYDKAAE
IAKKAILENK QIIDVVKELN IMDEKEAQEL LNPFEFIKFK E
|
|---|
| |