Gene Athe_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0467 
Symbol 
ID7407546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp537143 
End bp537895 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content30% 
IMG OID643714855 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_002572372 
Protein GI222528490 
COG category[L] Replication, recombination and repair 
COG ID[COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.301145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA AAGTAGACTT TGAATCCCAA AAGCCAATAG AACTTCCTAT TCATTACAAC 
TACTTTGTCC AGTCCATGAT ATACAATACT ATTGATGATA AAATCTATGC AACATTTTTA
CATGATAAGG GATATGAGGT TGATTTGAAA AACTTTAAAT TGTTTTCATT TTCTCGCTTA
GAAGGACCAT TTAAAATTGT GGGAAATGAT TCAAACAAAA AGATAATTTT TGACAAAAAA
GTTTCACTTA TAATCTCTTC ACCTGTTGAG GATTTTATAA CAAAGTTTTC AACTGGGCTT
TTAAAAAAAG ACCAAATTTA TCTAAAAGAT AATATACTAT ATGTGACATC TGCAAACATG
CTTAAAAGAC CAAAATTTTC AAGTTTCCAT AAAATAAAAA TGTTATCTCC TATGTGCGCA
TACAAAACAA TCAGAAACGA AAATTCAGAA TACAAGCACT TTTTTACTCC TTTTGATGAT
GAGTTTTATA ACCTCATTTC TCAAAACCTG ATGAAAAAAT GCAAGCTTTT AATAAAAGAC
TTTGACGAAA AAAGCTTTAG ATTTGATTTA AAACCACTGA AGGTTGAAGA AAAATCACAC
TTTAAACCCA TGCTTTTTAA AAAGACGCCC ATAAAAGGCT GGCTTGGTTT TTATACAATT
GAAACTGACC CAATAATAAT GGAGGTAGCA TATTACTGCG GACTTGGTTC AAAAAATTCT
CAGGGATTTG GACTTTTCGA AATCATTGAG TAA
 
Protein sequence
MRIKVDFESQ KPIELPIHYN YFVQSMIYNT IDDKIYATFL HDKGYEVDLK NFKLFSFSRL 
EGPFKIVGND SNKKIIFDKK VSLIISSPVE DFITKFSTGL LKKDQIYLKD NILYVTSANM
LKRPKFSSFH KIKMLSPMCA YKTIRNENSE YKHFFTPFDD EFYNLISQNL MKKCKLLIKD
FDEKSFRFDL KPLKVEEKSH FKPMLFKKTP IKGWLGFYTI ETDPIIMEVA YYCGLGSKNS
QGFGLFEIIE