Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0467 |
Symbol | |
ID | 7407546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 537143 |
End bp | 537895 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643714855 |
Product | CRISPR-associated protein Cas6 |
Protein accession | YP_002572372 |
Protein GI | 222528490 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.301145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATAA AAGTAGACTT TGAATCCCAA AAGCCAATAG AACTTCCTAT TCATTACAAC TACTTTGTCC AGTCCATGAT ATACAATACT ATTGATGATA AAATCTATGC AACATTTTTA CATGATAAGG GATATGAGGT TGATTTGAAA AACTTTAAAT TGTTTTCATT TTCTCGCTTA GAAGGACCAT TTAAAATTGT GGGAAATGAT TCAAACAAAA AGATAATTTT TGACAAAAAA GTTTCACTTA TAATCTCTTC ACCTGTTGAG GATTTTATAA CAAAGTTTTC AACTGGGCTT TTAAAAAAAG ACCAAATTTA TCTAAAAGAT AATATACTAT ATGTGACATC TGCAAACATG CTTAAAAGAC CAAAATTTTC AAGTTTCCAT AAAATAAAAA TGTTATCTCC TATGTGCGCA TACAAAACAA TCAGAAACGA AAATTCAGAA TACAAGCACT TTTTTACTCC TTTTGATGAT GAGTTTTATA ACCTCATTTC TCAAAACCTG ATGAAAAAAT GCAAGCTTTT AATAAAAGAC TTTGACGAAA AAAGCTTTAG ATTTGATTTA AAACCACTGA AGGTTGAAGA AAAATCACAC TTTAAACCCA TGCTTTTTAA AAAGACGCCC ATAAAAGGCT GGCTTGGTTT TTATACAATT GAAACTGACC CAATAATAAT GGAGGTAGCA TATTACTGCG GACTTGGTTC AAAAAATTCT CAGGGATTTG GACTTTTCGA AATCATTGAG TAA
|
Protein sequence | MRIKVDFESQ KPIELPIHYN YFVQSMIYNT IDDKIYATFL HDKGYEVDLK NFKLFSFSRL EGPFKIVGND SNKKIIFDKK VSLIISSPVE DFITKFSTGL LKKDQIYLKD NILYVTSANM LKRPKFSSFH KIKMLSPMCA YKTIRNENSE YKHFFTPFDD EFYNLISQNL MKKCKLLIKD FDEKSFRFDL KPLKVEEKSH FKPMLFKKTP IKGWLGFYTI ETDPIIMEVA YYCGLGSKNS QGFGLFEIIE
|
| |