| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0463 |
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| Symbol | smpB |
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| ID | 7407542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | - |
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| Start bp | 530141 |
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| End bp | 530617 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643714851 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_002572368 |
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| Protein GI | 222528486 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000143287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA AGAATAAACA GAATGACATA AAAGTCATAG CAACAAACCG CAAAGCTTAT
CATGACTACT TCATCGAAGA GACAATCGAA GCAGGAATTG AGCTAAAAGG CACAGAAGTA
AAGTCGGTGC GCCTTGGTCA TGTTAATCTC AAAGACAGTT TTGCCAGGGT TGAAAATGGA
GAGGTCTTTC TCTACAACAT GCATATAAGT CCATATGAAA AAGGCAACAT CTTTAACGTT
GACCCAATGA GAGATAGAAA ATTACTCTTG CACAAACATG AAATCAACAG GCTTGCGGGT
TATGTTCAGC AAAAAGGTTA CACTTTAATC CCATTGAAGA TTTACATCAA AAGAGGTAAA
ATAAAAGTAG AGCTTGCAGT TGCAAAGGGT AAAAAACTGT ACGACAAGCG TGAGGCAATA
GCAAAAAGAG ACGCTGAGCT TGAGATAAGA AAGAAGATGA AAGAGTATTT AAGATGA
|
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| Protein sequence | MSEKNKQNDI KVIATNRKAY HDYFIEETIE AGIELKGTEV KSVRLGHVNL KDSFARVENG
EVFLYNMHIS PYEKGNIFNV DPMRDRKLLL HKHEINRLAG YVQQKGYTLI PLKIYIKRGK
IKVELAVAKG KKLYDKREAI AKRDAELEIR KKMKEYLR
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