Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0447 |
Symbol | |
ID | 7407524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 506654 |
End bp | 508303 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643714834 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002572352 |
Protein GI | 222528470 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA AAAATAAAGA CTTAAACTGT AAAGCAAATA ATTATGCAGC TAAAATATCA ATAATATATG CAGTTGTGAG CGCAATTTGG ATTTTAATCT CTGATGTGCT AACAACAATT TTCTTTGCTA AAAAAGAGCT TGTTACTTTC ATTTCAGTAT TTAAAGGCTG GCTCTTTGTG TTTATCACTG CAAGCCTTTT GTATTTGTTG ATTCGCAAAA AAATCTATTC GCTTTACCTT TCTGAAAATA AGCTTCAAAA TGCTATCGAG GAACTTCAAA AGACAAATGA TGAGCTTTCC AAAACACAGG AAAAGCTTGT TGTCCAGTAC AAAAAACTTG CAAAAAACCA GGAAAAGATA AAAGAACTTG CTTACTTTGA CCAGCTAACT AATCTGCCAA ATAGAAATCA TTTTATGTTA GCTCTCGAAA AGGCTATCAG GGATGCTCAT TTCAAAGGGC AGCAACTTGC TCTGATGTGT ATCGATATTG ATAATTTCAG TAAAATTAAT AATACTCTTG GTCATGCGAC TGGTGACGTT GTTTTAAAAG AAATTGCGCA AAGGCTTAAA GAAGCGGTGG GTAATAACGG GTTTGTTGCA AGACTAACAG GAGATGAGTT TGGAATAATA ATTTATAATT TTCTTGATTT TAACGTCTTG AATTACTTCA TCTACAAAAT TTTTAATTTA TTTTCAACAT CATGGGAAAT AATGGAATAT AATTTTAATA TTACACCAAG TATGGGGATT GCTATATATC CTTCAGATGG GCAGGATAGT ATATCCCTTT TGAAGAATGC CGATAAGGCC TTGAATCTTG CCAAGGAAAA AGGCAAAAAT ACTTTCTGCT TTTACAATCT GGAAATGGAC AATATACTTC AGCAGAGGCT TGAATTCGAA TCAGACTTGA GAAAGGCGAT TGAAAAAGAC CAGTTCGTTT TGTATTATCA GCCTATTGTA GACCTTGAAA AAATGCAGCT GTGCGGAGCA GAAGGGCTTA TTCGCTGGAT ACATCCACAA AAGGGGCTTA TATCGCCCAT GTCTTTCATC CCAATTGCTG AGCAGACAGG ACTCATATCA CAAATTGGTC AATGGGTATT GACAAAGGTC ATTACGGATT TGAAGAGCAT CAGAGAAGTA ACAAACCACA ACTTTTATAT TTCTTTCAAT GCGTCCTTAA GAGAGTTTTC AAGCGCAAAT TTTGTTGATA ACGTACTTTA TACAATTGAA GCCTTAAAAG GTGACCCAAC TTCTTTGGGA ATAGAGATTA CAGAATCGGT TGCAATGGCA GACCCTCAAA ATACCATAAA GTCGCTGAAC ACCTTCAAAG AAAAAGGCAT TAAAGTTTTT CTTGACGACT TTGGCACAGG TTATTCTTCC TTGAACTATC TAAAACAGCT TCCCATTGAT GTTGTTAAAA TCGACAGAAG TTTCATAGCC AATATGAGCA CTGACATTAA AGAACAAAAA ATAGCCAAAA GCCTGATTAA CCTTTCTCAC ATCTTAGATT TAAAAGTTGT GGCAGAGGGT ATTGAAAATA GTCAGCAGGC TGAGATATTA AAATCTTTTG AGTGTGATTT TGGACAGGGA TATTTGTTTG GAAAACCTCT TCCAAAAGAC CAATTTATAG AGTTTGCAAA GAGGTTTTGA
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Protein sequence | MSEKNKDLNC KANNYAAKIS IIYAVVSAIW ILISDVLTTI FFAKKELVTF ISVFKGWLFV FITASLLYLL IRKKIYSLYL SENKLQNAIE ELQKTNDELS KTQEKLVVQY KKLAKNQEKI KELAYFDQLT NLPNRNHFML ALEKAIRDAH FKGQQLALMC IDIDNFSKIN NTLGHATGDV VLKEIAQRLK EAVGNNGFVA RLTGDEFGII IYNFLDFNVL NYFIYKIFNL FSTSWEIMEY NFNITPSMGI AIYPSDGQDS ISLLKNADKA LNLAKEKGKN TFCFYNLEMD NILQQRLEFE SDLRKAIEKD QFVLYYQPIV DLEKMQLCGA EGLIRWIHPQ KGLISPMSFI PIAEQTGLIS QIGQWVLTKV ITDLKSIREV TNHNFYISFN ASLREFSSAN FVDNVLYTIE ALKGDPTSLG IEITESVAMA DPQNTIKSLN TFKEKGIKVF LDDFGTGYSS LNYLKQLPID VVKIDRSFIA NMSTDIKEQK IAKSLINLSH ILDLKVVAEG IENSQQAEIL KSFECDFGQG YLFGKPLPKD QFIEFAKRF
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