Gene Athe_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0345 
Symbol 
ID7409275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp393814 
End bp394752 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content37% 
IMG OID643714731 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002572254 
Protein GI222528372 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG GGTTTTTAAC AGCCTGCCTG CCAAAACAAA GCCTTGAAAA TCTTGTTGTG 
TGGGCAAAAA GCATTGGTTT TGAGATGCTG GAGGTTGCGT GCTGGCCTGT AAAAAATACA
AGAGACTACT CTGGTACAAC ATTGGATGTT GCAAATCTTA CAGAAGACCA AGCAGAAAGA
ATAAAAAAAC TTTTTGAGCA GAACAATATG CAAATTTCTT CTCTTGCATA CTATGACAAC
AACCTGCACC CTGACCTTGT GATAAGAAAA TCTTACCATG ATCATTTAAA AAAGGTTATT
AATGCAGCAA ATCTTCTTGG CGTCAAGTAT GTTGGGACCT TTGTTGGGAG AAACTATAAC
AAGACAATCA AGGAAAACTT TGATGAGTTT GAGATTGTGT TTAAAGAGAT TTTGGAGTAT
GCAAAGGAAA AAGGAGTTTC TATTATAATA GAAAACTGTC CTATGCCAGG CTGGAACCCA
AACGGTGGAT GGATGGGGAC AATATCATAT TCACCTGAAC TTTGGGAAGA AATGTTTTCA
AGGCTACCTT ACGACAATTT TGGTTTGAAC CTTGACCCGT CACACCTTCT TTGGCTTGGT
ATTAACCCTG TTTCGGTCAT AAAAGAGTTC AAAGACAAAA TATTCCATGT CCATGCAAAG
GATACTCAGA TTTTGAAAGA CAAGCTCAAT AAATATTCCA TTTTTGGTAG CCAGATTCAA
AGGAAAAATG AATGGGATAT GGGATATTGG GTGTACAGAA TGCCAGGTCG TGGCGAGATT
GACTGGAAAG CATTTTTGAA AGAGCTAAAA CAAAACGGCT ATAACTTTGT TGTGAGTATA
GAACATGAAG ACCCAGAGTA TGAAGGGACT GAAGAAAAAG TAAAAGAGGG ATTGAAGCTT
GGGTTTGAAT ATTTAAAGGA TGTTATCACT AAAATATAA
 
Protein sequence
MKLGFLTACL PKQSLENLVV WAKSIGFEML EVACWPVKNT RDYSGTTLDV ANLTEDQAER 
IKKLFEQNNM QISSLAYYDN NLHPDLVIRK SYHDHLKKVI NAANLLGVKY VGTFVGRNYN
KTIKENFDEF EIVFKEILEY AKEKGVSIII ENCPMPGWNP NGGWMGTISY SPELWEEMFS
RLPYDNFGLN LDPSHLLWLG INPVSVIKEF KDKIFHVHAK DTQILKDKLN KYSIFGSQIQ
RKNEWDMGYW VYRMPGRGEI DWKAFLKELK QNGYNFVVSI EHEDPEYEGT EEKVKEGLKL
GFEYLKDVIT KI