Gene Athe_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0340 
Symbol 
ID7409270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp386552 
End bp389407 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content34% 
IMG OID643714726 
ProductUvrD/REP helicase 
Protein accessionYP_002572249 
Protein GI222528367 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA TAATCATATA TACTGCTTCT GCTGGCTGTG GCAAGACAGA AAGTATAGCA 
AACCTTTATA TAGACCTCAT AAATTCCCAA AAAGCTTTGC CAAGTGAAAT TGTCTGCATA
ACGTATACAG AAAAGGCAGC AAGAGAGCTT AAAAACAGAA TAATCTCAAA AGCAAAACAA
AGAGGGCTTG ATTTGCTCAC AATTTCAAAG ATTCAAAACT CTCATATTAA AACCATACAC
TCATTTTGTA TGTATCTTTT AAGATTTTAC TGGGCATGGG CGAAGGTTGA CACAAACTTT
AAAATTGTCC CTGAACAGAA TAGGCTAATA CTAAAGCTTG TGGACCATTA TCTTTCAGTT
TATCCTGAAA CTTTGTGGAA ACTGTCACAT GAGAGGTTTT TCATTGAAGA GTATTTTCAC
TTCGCAGAAA GTATTGTACA GGAGTATTTT AATTCAGCAA AGTATGTTGA AAAAGCTTGC
CACCTTGAAG ATGAAATGTT TCATGTTTTC GATTACTTAT CAGACAGGTT AAATGACCAG
TTTTTAAAAG AACTCACATA CGATTTGGTT TTGCATAGGA CCTTTGAACT TTTAAGCATT
CCAGAAGTAA ATAGAGATGT AAAGAGCAGA TTTAAATTCT TGATTGTTGA CGAGTTTCAA
GATTCAAACT TTTTACAAAA ATCAATCTTT GAAAATATAG CTGAAAACAT TTATTATGTT
GGAGACAAAA AACAGTCCAT TTACCGTTTT CAGGGTGCAG AGCCAGAGGT TTTTGATGAA
GCAATGGAAA GCTGCAGCCA GGTTTTAGAG CTCTGTGAAA ACTTTAGAAC AAACTCTGAG
CTTGGCAAAA AGATAGATAT GATAAGCAGC ATGCTTTTTC CAAACTACAA ACCACTTTCT
TATAAGCATC AAGCTGACGG ATTTTTAAAG GTTGTGGAGA TTGTAAATCC AACAAGAGAA
GAGATTATTC AAAATGAAGC TATTTATGTT GCAAAAAAGA TAAAAAAGAT GGTTGAAAGT
GGTTTTGAGA TAAGTGTGGG TGGCAAGCCA AAAAGAAAGG TGAAATACTC TGACTTTGCA
GTTCTGTCGC GAAAAATTCA AAACATTGCT CATATTTACA AAAGGGTGTT TGAGGATTAT
GATGTTCCAC TTGATATTAA CTTCAAAAGA GGGCTTTTGG AACAAAAAGA GATAGTGCCG
CTTTTGGGCC TTCTTGAGAT TTTGCAATAT CCAGACAAAA AATCTGGGTA CTTGAGACTT
CTTGCAAATG ACATATTTAA AGTGGACAGA TTCACGCTTC TCTTTTGCGA GATGAGCAAA
ATAGAATGTT ATGTTCCAGA AGATGTTTTA AAGTTCATTG CAAAACAGCG TGATAACCTG
TTTGTCAAAA AGATTTCAGA GATTTTGTAT GAGTTTGAAG ACATGTTCGA ATATAGCTAC
AAGGTCTACA AGTTTTTTGG CAAGTGTGCA TACGAAAATG TCAGACTTTT TTATGACTTG
GCAGAAGAGA GCAAAAGCTT TTCGATAGAA GACCTTTGCA GTTTTGTAAA TTATCAAGGC
GAAAGGTTTT CGAGCTTTTC TTCTTTTAAT GACAGCGCAG TATTGCTTAG CATACATTCA
GCAAAAGGAC TCAGCTTTCC AATAGTGTTT TTGGTCGGAC TTTGCGAAAG TACAGGGTAC
TTTCCGGGCA GAAGTCCAAA ACTGAGAGGT TCTTATGACA CAAGCACAAG AGAATATATA
ATTGCTCCTT TTTGGATGGA AAAAGAATAC ACAAGAATAA AGAATATATC AAAACAGCAG
GAAAAAGAAG AACTTAAAAG GCTTTTTTAT GTTGCCATAA CAAGACCGAT GGCAGGGCTT
TTCATGATAA ACTCAAGCTT AAGAGAAGCT ATAAAGAAAA GAGGAGGAGT AAAGTCGTTT
GGTGAAGAGG TGGGTTTGAA TTACATTCTC GCAAAGGCAG AAGAGATTGG AATTGAAAAA
GAAGTTGTGG AGATAAAAGA CACTGAAGAA GATCTATCTA ATGATTTTAC TTGTAAACAG
AAAAATACAA TTAGCAGTGT ATTACCTCTA ATGATTCTGC CTGACGAGTT TGAAAATAGG
TTTAAGTTTT TGTCACCCTC ACACATAATG GATTTTAAAA GATGCCCTGC CATGTTTTCG
TTAAAGTACA TCATGGGTCT TCCAGTTTTT GATGAGCTGA GTTCAAGAGA GGAGATACAA
CAGAACGCAA AAGTACTTGG CACCACAGTG CACAGAGTTT TAGAGCTCAC AAGCTTGAAA
AATATTCAAA GCTTAGATAG CAACATTGCC TTAGCCGTGC TTGAAAATAA CTTTGAGGAT
GAAAAGATTG TGAAAGAGCT TATTTTAAAC TTTTTTGAAA GCCAGTTTGT AAAAGAAATC
AAAGATAAAG TGATAAAAGA AGAAAGCGAA CTCCCGTTTT ATTTTAAACT TAGCAATCAA
ATGATATATG GCATAATTGA CAAGGTGTAC CATCTTGAAG ATGAAGTTTT ACTTGTTGAT
TTTAAAACAA ACCTTCATTT TGATGATACA AAATTCAATA TTTACATTCC CCAGCTTTTC
ATTTACACAA AAGCCATGAA AGAGAGATTT CCTTCCAAAA AGATTTTTTC TTCCATCTTC
TGGTTAAGAG AAGGGAAAAA GTTTGACTAT GAGCAAAAAG ATGAACACCT TGAAAATGTA
ATTGATGTGA TAAAAAAAAT AAGAAATATC AGAACCAGAA AGGATGTACT TGAGCTTATT
GAAGATTCTT TAGATAGAAA TTGCAATGGC TGTGAATATG AATTTTACTG CAAGGATGAG
CAAAATATTA AATTGGTAAG GAAAAAGCTT GAATAG
 
Protein sequence
MSNIIIYTAS AGCGKTESIA NLYIDLINSQ KALPSEIVCI TYTEKAAREL KNRIISKAKQ 
RGLDLLTISK IQNSHIKTIH SFCMYLLRFY WAWAKVDTNF KIVPEQNRLI LKLVDHYLSV
YPETLWKLSH ERFFIEEYFH FAESIVQEYF NSAKYVEKAC HLEDEMFHVF DYLSDRLNDQ
FLKELTYDLV LHRTFELLSI PEVNRDVKSR FKFLIVDEFQ DSNFLQKSIF ENIAENIYYV
GDKKQSIYRF QGAEPEVFDE AMESCSQVLE LCENFRTNSE LGKKIDMISS MLFPNYKPLS
YKHQADGFLK VVEIVNPTRE EIIQNEAIYV AKKIKKMVES GFEISVGGKP KRKVKYSDFA
VLSRKIQNIA HIYKRVFEDY DVPLDINFKR GLLEQKEIVP LLGLLEILQY PDKKSGYLRL
LANDIFKVDR FTLLFCEMSK IECYVPEDVL KFIAKQRDNL FVKKISEILY EFEDMFEYSY
KVYKFFGKCA YENVRLFYDL AEESKSFSIE DLCSFVNYQG ERFSSFSSFN DSAVLLSIHS
AKGLSFPIVF LVGLCESTGY FPGRSPKLRG SYDTSTREYI IAPFWMEKEY TRIKNISKQQ
EKEELKRLFY VAITRPMAGL FMINSSLREA IKKRGGVKSF GEEVGLNYIL AKAEEIGIEK
EVVEIKDTEE DLSNDFTCKQ KNTISSVLPL MILPDEFENR FKFLSPSHIM DFKRCPAMFS
LKYIMGLPVF DELSSREEIQ QNAKVLGTTV HRVLELTSLK NIQSLDSNIA LAVLENNFED
EKIVKELILN FFESQFVKEI KDKVIKEESE LPFYFKLSNQ MIYGIIDKVY HLEDEVLLVD
FKTNLHFDDT KFNIYIPQLF IYTKAMKERF PSKKIFSSIF WLREGKKFDY EQKDEHLENV
IDVIKKIRNI RTRKDVLELI EDSLDRNCNG CEYEFYCKDE QNIKLVRKKL E