| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0227 |
|---|
| Symbol | |
|---|
| ID | 7407218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 272944 |
|---|
| End bp | 275385 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643714627 |
|---|
| Product | glycoside hydrolase family 2 sugar binding |
|---|
| Protein accession | YP_002572150 |
|---|
| Protein GI | 222528268 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAATAA ATCTTGACGG AAAATGGAAG TTCAGAGAAG TTGGTCAGAA TGAGTACTAC
GAGGCAAGTG TGCCAGGATG TGTCCAGCTT GATTTGATTA ACCTTGGAAA GCTTCCCGAC
CCTTTTTATG CCACAAACGA GGTTTTGTTT TATGACTTAG AAGAAAAAGA TTTTGAGTAT
GTAAAAGAGT TTGATGTTGA TAATGTCGAT TTTCAGGTCA AAAAGCTTGT GTTCGAAGGA
ATTGATACGG TATCTGAGAT TTATTTAAAT GACCATTATT TGGGTAAGAC CGACAACATG
TTTTTGAAGT ATGAATTTGA TGTGAGTCTT GCACTTAAAA AAGGGAAAAA CATTTTAAAG
GTGGTCCTTC TTTCACCAAT AAAAGAAGCA GAAAGGCTCA AAAGCATTTA CCAGTCAAGC
TACAGCTATC CGCAAAGAAG CTGGATAAGA AAGTCGCAGT ATTCATACGG CTGGGACTGG
GGGCCAAGAA TTCTCCAGAT AGGAATCTGG AAGAGCGTGT ATTTAGAGCT TCACAATGGG
CTTGAAATTC AAGATGAGTT TGTAAAAGTG GAAAGTATCT CAGATGAGCT TGCCATTGTA
AGAGTGTTTG CAAAGATAAA CTGTTTTGAA AAACCATCAG AAGTAGAGAT AGAGTTATTT
GATGGTAGCT TTTCTGTGAA AGTTTTTCCA GAGGTTTATA AATCAAAAGA TGGGTATTTT
ATTGATGAGA GGATTGAGAT AGAAAACCCC AAACTTTGGT GGCCAAACGG GTATGGGGAG
CCTTCTTTAT ATGAGTTTAA AATAACTGCA AAGACTTCAA ATGAAGCTCA AGAAAAGAAG
GTCACAACAG GCCTCAGGAC TGTAAGAGTA ATAAAGGAAA AGGATGAATA TGGCGAAAGT
TTTATCTTTG AGATAAATGG CAAGAAGATT TTTGCAAAAG GAGCAAACTG GATACCTGCA
GATTCCATCC TGCCAAGGCT GAAAGAAGAT GACTATAAAG AATTAATTAA AATGGCAAAA
GATGCGAACA TGAACATGCT CAGGGTCTGG GGCGGCGGTA TTTATGAGTA TGACTGGTTT
TACGACGAAT GTGACAAAAA CGGTATAATG GTGTGGCAGG ATTTCATGTT TGCATGCGCA
ATCTACCCTG ATGAGTTTGA CTTTTTCGTT GAGAATTTCA TAAAGGAGGC AGAGTACCAG
ATAAAGAGGC TCAGAAACCA TCCGTGCATT GTGCTGTGGT GTGGGAATAA CGAAAACAAC
TGGGGCTTTA GAGATTGGTG GCACATCGGC GATCCAGAGT TTTTGGGCAA CAGGATATAC
AAAAAGGTGC TTCCTGAAAT TCTGGCAAAA CTTGACCCAA CAAGACCGTA CCACATCTCA
AGCCCGTATG GAGGTGAGCA TCCAAACAGC GAAAAAGCTG GCGACAAACA TACATGGGAT
ATCTGGGCTG GCTGGAAAGA CTACATCTAT TATAAGCACG ACAATGCAAG GTTTGTCTCT
GAGTTTGGTT TTCAGGCGGC AGCACACCTT GATACAATGA AAAAGTACAT TCCTCTTAAA
GACCAAACAA TCTTCTCAAA AACTTTGAGA ATGCACGAAA AGCAGGAAGA AGGTTTGGAA
AGGCTTATAA GGTATATGGC AGGCTCAATT GGTCTACCAA AAGACTTTGA CTCTTTTGTG
TATTTGTCAC AGTTTGTTCA AAAAGAGGCT ATTAAGCTTG CGGTTGAGCA TTACAGGAAG
AATAAGTTCG CAACAGCAGG GGCTCTTTAC TGGCAGCTTA ATGACTGCTG GCCTGTCATC
TCATGGTCGT CAATTGACTA TCTGAAAAGA AGAAAAGCAC TTTACTATGA GTCAAAAAGG
ATATTTGCAA AGTTTTTGCC AGTGGTTGAG TATGAGGATG GAAAACTAAA GGTATATATT
GTTAGTGATG AGCTAGAGCC AAAACAAGGT AAGCTCAATA TTACAATCTG GAACTTTGAT
GGGCAAAAGT TATACGAGAA AAACCTAACT GTGGAAATTC CTGAAAATAG TGTGGTTGAG
GCATTTTCTG AAAAAGTAGA AAACTTGAAT ATTTTAAAGG GCGAGTGGTT GTATATACCC
AAACATGTTG AAACGGCTGT AATTGGGGAT AAGATAGACA GAGGACTTTT GGAAAGCATA
GTTTTTGTGA GCCTTTTTGT CGATAGAGTA GAGTACGAAA ATTACTTTGT ATTTGAAAAG
CCAATAAACC TTGAACTAAA ACCCAGTCAG TTTGAGTACA GAATAGAAGA TGACCATATT
ATAATAAAAC CCAAAACTCC TGCAATTTGC CTTATAATTG AAGCTGACAG GGATGTAGAG
AACAACTTCA TTTTTGCGAG ACCTGAAAAA GAGTATAAGA TTAATCTAAA TGGAGGACAG
GTCAGAAAGG TTTGTGATTT GTTAGATTTG ATTGAGCGAT GA
|
|---|
| Protein sequence | MRINLDGKWK FREVGQNEYY EASVPGCVQL DLINLGKLPD PFYATNEVLF YDLEEKDFEY
VKEFDVDNVD FQVKKLVFEG IDTVSEIYLN DHYLGKTDNM FLKYEFDVSL ALKKGKNILK
VVLLSPIKEA ERLKSIYQSS YSYPQRSWIR KSQYSYGWDW GPRILQIGIW KSVYLELHNG
LEIQDEFVKV ESISDELAIV RVFAKINCFE KPSEVEIELF DGSFSVKVFP EVYKSKDGYF
IDERIEIENP KLWWPNGYGE PSLYEFKITA KTSNEAQEKK VTTGLRTVRV IKEKDEYGES
FIFEINGKKI FAKGANWIPA DSILPRLKED DYKELIKMAK DANMNMLRVW GGGIYEYDWF
YDECDKNGIM VWQDFMFACA IYPDEFDFFV ENFIKEAEYQ IKRLRNHPCI VLWCGNNENN
WGFRDWWHIG DPEFLGNRIY KKVLPEILAK LDPTRPYHIS SPYGGEHPNS EKAGDKHTWD
IWAGWKDYIY YKHDNARFVS EFGFQAAAHL DTMKKYIPLK DQTIFSKTLR MHEKQEEGLE
RLIRYMAGSI GLPKDFDSFV YLSQFVQKEA IKLAVEHYRK NKFATAGALY WQLNDCWPVI
SWSSIDYLKR RKALYYESKR IFAKFLPVVE YEDGKLKVYI VSDELEPKQG KLNITIWNFD
GQKLYEKNLT VEIPENSVVE AFSEKVENLN ILKGEWLYIP KHVETAVIGD KIDRGLLESI
VFVSLFVDRV EYENYFVFEK PINLELKPSQ FEYRIEDDHI IIKPKTPAIC LIIEADRDVE
NNFIFARPEK EYKINLNGGQ VRKVCDLLDL IER
|
|---|
| |