Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0125 |
Symbol | |
ID | 7408487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 147106 |
End bp | 149433 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643714533 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_002572056 |
Protein GI | 222528174 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 [TIGR01596] CRISPR-associated endonuclease Cas3-HD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCCT ATGAGGATAT AGATCTTTAC GCAAAGAGAT TTAAAACTGA GAAAGGTTAT GAATACCAGA CAATATACGA ACATACAATG ACACTACTGC AGAATATGGA AAAATTATTC AAAGAGTATA GAGAGGAGAT CGAAGAAGGT TTCCAAAAAC TTCAGATTGA CCTTGAGATG TTTAAATATT TGCTAAAATT AGCAATAATA TATCATGATT TGGGCAAGGC GAATTCAAAC TTTCAAAGAA AGATAAGAGA CAAGACAAAA TCAAATGAGG TACCTCAAGT AAAGTGCTTG TCTGTGGAGG TACCTCATAA CTTTATCTCA ATAGCTTTTG TGGCTTTGGA AGATGAGATA GACAAGGGGA ATATCAGCCC AGAAGATTTT GAAAATTTGC TTTTTGCTAT TGCATTTTCG CATGACAGGG GTTTTGATTT CAACTACCAA TATTTTGAAA AATACATTTG TGAGGATGTT TCAAAGTATT TAACTAATAA GACATTACTT CCTTTGTTTA AAGAACTTCC TTCATTTCCT ACCAAAGATG AAATAGAGAA GAGTTCAAAC TATGTATATA GAACTATTGA CTGGTTGAAA GAGGTCATGC TCAAAAGTTA TACCGACCTT TACAATAAAA ACACAATTAT GAGAATTCTT TTGAAAGGTT TTCTTCATAG ACTTGATCAT TCAAGTTCTG CAGGAATTAG TACAGAAGAA GGAAAGATTA CAGATTTTTC TCATAAGGTT GAGAGCTACT TGAAAGAAAA GGGGAATTTC GTTGGTTTTA AAGAATTTCA GCTAAAAGCT TTAGATTTCT CAAACCAGAA TGTTATTTTA TTTGCTCCCA CAGGCAGTGG TAAGACAGAG TTTGGCTTAA ACTGGGCAGG CAGAAGCAAA TTAATTTACA CTCTTCCAAT TCGTGTTTCA ATCAACGCAA TGTACGAAAG ACTGGCGAAA ATTTTTGGTA GTAATAAGGT TGGAATATTG CATTCTGACA GTATGATTTA TCTGCTTGAA AAGTATTCAC AATCAGCTGA AGATGTCCAA GAGTTAGAAT CCTTATTTGA CAATGTAAAC CTTGCGAGGA ATTTAAGTTT TCCGATAATT GTAACAACCG GCGACCAGAT TTTTACATCT GCTTTAAAAT GGCCCGGTTT TGAGAAAATA TATTCGTTAT TCTTATACTC AAAGATTATA ATTGATGAGC CACAAAGCTA TTCTCCAGAG TCTTTGGCAA TTATAATAAA GACCTTAGAA GAAATAGTAA ATTTAAATGG ACGATTCTGC TTGATGAGTG CCACTGTAAA TCCTCTTGTA CTAAAGTATC TTGGAGATAT TTCTGAATAT TTACAGGCAT ATTCAGATGA AGAATTAAAA AAATGCTGGT CGCATGTTGT TTCGGTCAAA CCACTTTCTA TTTTAGATTG TGTAGATGAA ATTGTAAATT GTGGGAAGCA ACAAAATGTA CTTGTAATAT GCAACACAGT AAGAAGGTCA CAGGAAGTTT ATAAGGCTAT AAAAGAAAGC ATAGGAAATT CTGATGATGT CCCGGTTGAA CTTTTGCATT CAAGATTTTT GGAAGGGCAA AGAAGGCAAA AAGAACATTT TATTCTTTCA AACCAGAGAA AAAATAGTAT TGTAATTTCA ACCCAGCTTG TAGAAGCGTC ACTTGACATA GATTATGACG TTTTGTTTAC GGAACTGGCT TCTGCAGATT CATTGCTGCA GCGAATGGGG AGAGTATACA GGAAAAGACC ATATGAGGGG CAAAAACCAA ATGTTATTAT CCTAACAAAG GAACCAAGCG GAATTGGAAG AGTTTATCAG AAAGAAATTG TTACTAGAAC AGAAGAGTTT TTGAAAAGGT TTGACGGAAG AAAAATTACA GAATATGACA AAAAAGAGCT AAATGAATAT GCCTACGATG TTGAGGTACT TTCAAACACT AATTTCATGA AGAGTTTCAA AAAAGCATAT GAACTTTTGA AGTTAGGATT TAAAGCAGAT AGAAAGATTG AAGCTCAAAA GATTTTTAGG GATGTAGTTA CAGTTGAAGG TATACCGAGG AAGGTATTCG AGGTAAATGA AGAAACAATC AGAGAGTGCC TGAAGAGAAT AGGTTCAAAA TCTTTAAGCC CTATTGAGAA ACTGCAGCTA ATTTCAGATG TTCGAAAGTA CACAGTTACA GTTCCGGTGT ACTTTTTCGC AAAAGGTGGA GCGAGTGAGT ATAGCAAAAA GCTGGGTATA TTCATTTTAA ATTGTGATTA TGACGACGAG TTGGGCTTGT TACCACCTAA GGAATCAGAA AAAGATGATA TATGGTAA
|
Protein sequence | MKAYEDIDLY AKRFKTEKGY EYQTIYEHTM TLLQNMEKLF KEYREEIEEG FQKLQIDLEM FKYLLKLAII YHDLGKANSN FQRKIRDKTK SNEVPQVKCL SVEVPHNFIS IAFVALEDEI DKGNISPEDF ENLLFAIAFS HDRGFDFNYQ YFEKYICEDV SKYLTNKTLL PLFKELPSFP TKDEIEKSSN YVYRTIDWLK EVMLKSYTDL YNKNTIMRIL LKGFLHRLDH SSSAGISTEE GKITDFSHKV ESYLKEKGNF VGFKEFQLKA LDFSNQNVIL FAPTGSGKTE FGLNWAGRSK LIYTLPIRVS INAMYERLAK IFGSNKVGIL HSDSMIYLLE KYSQSAEDVQ ELESLFDNVN LARNLSFPII VTTGDQIFTS ALKWPGFEKI YSLFLYSKII IDEPQSYSPE SLAIIIKTLE EIVNLNGRFC LMSATVNPLV LKYLGDISEY LQAYSDEELK KCWSHVVSVK PLSILDCVDE IVNCGKQQNV LVICNTVRRS QEVYKAIKES IGNSDDVPVE LLHSRFLEGQ RRQKEHFILS NQRKNSIVIS TQLVEASLDI DYDVLFTELA SADSLLQRMG RVYRKRPYEG QKPNVIILTK EPSGIGRVYQ KEIVTRTEEF LKRFDGRKIT EYDKKELNEY AYDVEVLSNT NFMKSFKKAY ELLKLGFKAD RKIEAQKIFR DVVTVEGIPR KVFEVNEETI RECLKRIGSK SLSPIEKLQL ISDVRKYTVT VPVYFFAKGG ASEYSKKLGI FILNCDYDDE LGLLPPKESE KDDIW
|
| |