Gene Athe_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0124 
Symbol 
ID7408486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp146370 
End bp147119 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content34% 
IMG OID643714532 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002572055 
Protein GI222528173 
COG category[L] Replication, recombination and repair 
COG ID[COG1688] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01895] CRISPR-associated protein Cas5, Tneap subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA AACTTCTGAA GATTAAACTT TATCAGCCTT TTGCAAACTT CAGAAAACCT 
TTTTCATATG GAATAGTAGA TTCTTACCCT CTGCCTCCGC CTTCCACTGT AAAGGGTTGG
CTTCACAATA TCTTGGGGGC AAAAAATGGA GAATATTACA AAATGGCTGT TTCTATTTGT
GGAAAGTTTA ATTCCATCGT TTATGACATT CAAAGAATCA TAAAATTTGA CAGATTAAGA
AAAGAAGATT CCTCTGCTCC AATTTTAAAA GATGTCTCAG CGAGGGTATT AAATGGCATT
ATATATGTGA CCAACCTTGT TGATGTAGAG CTATGTATTC ATGTAAATGC AGAACAAGAG
GTTTTAAAAG GGATTTCTCT TGATATCTTT AATTCTTACT GGGGACTTGG AAGAAAAGAA
GACTTGTTGA GAGTGGATGA AGTGAAGTTC TTTGAACCTC AAGTTGTAGA GTATAGGGAG
TATGTAAAGC ACAAACTTCC TGACATAGGG ATGTATCTAA AGACAAGTAC TGCGGAGAAG
TTGAGGGTTG ATGGAATTAG GTTCAGATTG AATAATCGTT ATATAAAAAC CAAAGATGGT
CTTAGGATAT TTACGGATAA AAAGGATGTA GTGTATTTTG AAAATCTTCA ACATTTAAAC
CCTATAATGT CTGTTAGTGA TAAGCTGTTA GTAGATGATG AAAATATTCT TATTGATTTA
ATAGGTGATG ATGAGTATGA AAGCCTATGA
 
Protein sequence
MSQKLLKIKL YQPFANFRKP FSYGIVDSYP LPPPSTVKGW LHNILGAKNG EYYKMAVSIC 
GKFNSIVYDI QRIIKFDRLR KEDSSAPILK DVSARVLNGI IYVTNLVDVE LCIHVNAEQE
VLKGISLDIF NSYWGLGRKE DLLRVDEVKF FEPQVVEYRE YVKHKLPDIG MYLKTSTAEK
LRVDGIRFRL NNRYIKTKDG LRIFTDKKDV VYFENLQHLN PIMSVSDKLL VDDENILIDL
IGDDEYESL