Gene Athe_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0048 
Symbol 
ID7407283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp64264 
End bp66060 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content37% 
IMG OID643714458 
ProductABC transporter related 
Protein accessionYP_002571983 
Protein GI222528101 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000163685 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACC CTGTGGCCAA AAAGCCAATG TTTTCTCAAG AAGAGACAAA TTACGAATTG 
AAGATACCAT ATTTGAAAAG GCTTTTTAAG TTTCTTCTTC CTTACAAAAA ATGGCTGGTT
TTAACCTTGA TTTTCATGTT CGTAGCAACA GTTGCCGAGT TAGTTTCTCC CTACCTTTTG
AAACAGGCAG TTGACTACTA TATCCCCAAA AAAGATTTCA AGGGAATTTT AATAATTGGA
GTTTTGCTCA TTTTGATGCT TTTCATAAAC AAAGAGTGCT CGAAAAACAA GATAAGGCTT
GCAAACAGAA CAGGGCAGAT GGTTTTGTTT GATATCAGAA AAGCTCTTTT TGACCACGTT
CAAAGCCTTT CTTTCAGCTT TTTTGAAAAA AACTCAACAG GAAGAATTAT TGTTAGAATT
GTCAATGACG TCAATACTTT GAACAACCTC TTTACAAACG GCATTGTAAA TGTAATAACA
GACATGTCAA GCTTGGTTTT AGCAGCAATA ATAATGTTTT CTATAAATCC TAAGCTTGCA
ATAGTGACAT TTGCAGCTTT GCCAATTTTT TTAGTAGTTC TTTTTACAAC CAGAAACGCC
ATAAAAAGAA ACTGGAGGAC TGTGCGAAGG AAAATTGCAA ACTTAAATGC GTATATACAC
GAAAACATAT GTGGTATCAG GGTGATTCAG GCATATGTCA GGCAAAAGGT CAACAGGGCT
ATTTTCAAAG ATGTCATAGA TGATGTGTTT TTGTCATGGA TGAAGGCGGT CAGGATAAAC
GGCATATTCT CACCTGCGGT TGAGGTATGT TCAATGATAG GAACGCTCAT CATCTACTTT
TACGGTGTAA AGCTTCTTAA AATAAACGGT GTTACAGTTG GAACTTTAAT TGCTTTTGTT
AGCTATTTAG ACAGGTTTTG GCGACCGGTT GTTACACTTT CAAACTTTTA CAATCAGCTT
CTTGTTGCAA GCGCATCGTC AGAAAGGATC TTTGAGGTGC TTTCTATCCA GCCCGAAATA
AAAGAGGATA AAAATCCGGT AGAGATATCT ACTTTTAGAA ATTCGATCGA ATTTAAAAAT
GTGTGGTTTG CGTACAAAGA TGAAGAATAT GTTTTAAAAG ATGTGTCGTT TGAAATCAAA
AAAGGAATGA TGGTTGCGCT TGTGGGTGCA ACAGGCTCTG GCAAAACCAC AATTGCAAAT
CTTCTTTCAA GGTTTTACGA CCCGCAAAAA GGCAGTATCC TCATTGATGG CATTGATCTT
AAGAAAATTA GCTTTAAAAG TTTAAGGAAA CTTATAGGTA TTGTCCAGCA GGAACCATTT
TTGTTCTCAG GAAGCATCCT TGACAATATT CTGTATGGAA AACCAGATGC CAAGTTTGAA
GAGGTTATAG AGGTTTGCAA GTTTTTAGGT GCACACGAAT TTATATCGCA GTTTGAGGAT
GGTTACTTTA CACAGGTAAA TGAAAGGGGA AACAGGCTAT CTACTGGACA AAAACAGCTG
ATAAGTCTTG CAAGGCTTTT GCTTCAAAAC CCCCAGATTC TTATTTTGGA TGAAGCAACG
GCATCGCTTG ATACACATAG CGAGCTTATG GTGCAAAACG CTTTAAACAA GGTGATGAAA
GACCGCACTT CAATTGTGAT TGCTCACAGG TTATCTACCA TAAAGGATGC AGATCTCATA
ATTGTAATGG ACAAGGGCAG GATAGCTGAA ATGGGTACAC ACGAGAGCCT GATAAGGAAA
AAAGGTATCT ATTATGAACT TTGTGCAAGC CAGATAAGAT TTGTAAAGGC AGGGTGA
 
Protein sequence
MADPVAKKPM FSQEETNYEL KIPYLKRLFK FLLPYKKWLV LTLIFMFVAT VAELVSPYLL 
KQAVDYYIPK KDFKGILIIG VLLILMLFIN KECSKNKIRL ANRTGQMVLF DIRKALFDHV
QSLSFSFFEK NSTGRIIVRI VNDVNTLNNL FTNGIVNVIT DMSSLVLAAI IMFSINPKLA
IVTFAALPIF LVVLFTTRNA IKRNWRTVRR KIANLNAYIH ENICGIRVIQ AYVRQKVNRA
IFKDVIDDVF LSWMKAVRIN GIFSPAVEVC SMIGTLIIYF YGVKLLKING VTVGTLIAFV
SYLDRFWRPV VTLSNFYNQL LVASASSERI FEVLSIQPEI KEDKNPVEIS TFRNSIEFKN
VWFAYKDEEY VLKDVSFEIK KGMMVALVGA TGSGKTTIAN LLSRFYDPQK GSILIDGIDL
KKISFKSLRK LIGIVQQEPF LFSGSILDNI LYGKPDAKFE EVIEVCKFLG AHEFISQFED
GYFTQVNERG NRLSTGQKQL ISLARLLLQN PQILILDEAT ASLDTHSELM VQNALNKVMK
DRTSIVIAHR LSTIKDADLI IVMDKGRIAE MGTHESLIRK KGIYYELCAS QIRFVKAG