| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0040 |
|---|
| Symbol | |
|---|
| ID | 7407275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 52138 |
|---|
| End bp | 53079 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643714450 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002571975 |
|---|
| Protein GI | 222528093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATTA GAAAGATTAT TTCAAAAAAA CAGGGGAGTG AAAAAGTTTT GAAAAACATA
AAAAGATTTA TGATGGCCAT TTTCTCAAAT CCTATTGTCA CAAAAGAGAT AAAACAGAGG
ACAAGAGGGC TTAAGTTTTC GTTTACCATT GCTGGGTGGC TACTTCTTAT GACTCTATTT
ACAATAATGT TTTTAACATC ATATGCTAAG CCGGTTGTTG TGGTAAGTTC CTACAGAGGT
TTTTTCACTA CCTTTTGTAT CTTACTTATT TTTCTGTTTG CTGGGTTTTT CGGGCTGTTG
GTTGTAATTT TGAGTTCCCA GGCAATTGCA AAGGAAAAAG AAAATCAAAC ACTTGACATA
CTTCTTTCAA CGCCTTTGAC CAATTTTGAA ATTGTTGTTG GGAAGATGAT AGCAGCAGCT
GGTGAAGCGG TAATACTTTT CTTCTCTGCA GTTCCGATAT TGGTACTTCT ATATTTTTAT
GGTATAACAT CTATGGGGAA TATCTTGCTT ATTATGCTCT ATGTTTTTGT GCTCATCCTC
TTTTATGGTT CGCTGAGCCT TTTGTTATCA ACAGTTATCA AAAAGAGCAT AGCAGCAACT
GTGATTGTGG TAAGCATTGT CATTGCCTCT ACCATCTTTA GCTATTTTAT CTTTTTGACT
GGTGCACAGG TATTGGTTGC CAACTCGCCC CAGCCTGGAA AAGCTCAAAA TTTCTGGAGT
TTAATATCAA TTTCATTAAG CTCAGCTTTT TCTCTAATTG AGCTTATAAG TATTCGTTTA
AATTCAGCTC CAGCTGCTTT TTTTCAATAC TCATACAAAA TTAAAGGGTA TCAGATACAC
CTTATCATTT GCATAGTTGG AACAATATTG AACATTTATT TGAGTGCGCT ATTTTTAAGT
CCTCTGAGAA GAATCAGAAT ATTTAGAAGA AAGTCCAATT AG
|
|---|
| Protein sequence | MKIRKIISKK QGSEKVLKNI KRFMMAIFSN PIVTKEIKQR TRGLKFSFTI AGWLLLMTLF
TIMFLTSYAK PVVVVSSYRG FFTTFCILLI FLFAGFFGLL VVILSSQAIA KEKENQTLDI
LLSTPLTNFE IVVGKMIAAA GEAVILFFSA VPILVLLYFY GITSMGNILL IMLYVFVLIL
FYGSLSLLLS TVIKKSIAAT VIVVSIVIAS TIFSYFIFLT GAQVLVANSP QPGKAQNFWS
LISISLSSAF SLIELISIRL NSAPAAFFQY SYKIKGYQIH LIICIVGTIL NIYLSALFLS
PLRRIRIFRR KSN
|
|---|
| |