Gene Hlac_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3657 
Symbol 
ID7402450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp416816 
End bp418252 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content53% 
IMG OID643710190 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002567756 
Protein GI222481520 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG GTACGACTCC CCGAGAAAAC AAAAAATACG GACCTGACTG GTACCGAGTG 
CTCACTGAGC AAATAGACGA TCTCATAACA GTCGTCGATA CCGACGGGAC AATAACGTAC
GTTAGTCCTG CTGTCACACG GATTCTCGGC TATGATCCAG AGGAATTGGT TGGCTACGAG
GGATACGATT TTGTCCATCC TGAGGATCGA GAACGAAACG CCGACGCGAT AGAGACTGTT
CTATCGAATC CGTCTACATC CGAGACTGTC GAAGTCCGAT TCCGCCATGC CAACGGCTCG
TGGCGGTGGA TCGAGGCCAC AATACGGAAT CGACTCGACG ACGACATTAT CGATGGGATT
CTCCTTAGCA GCCGGGATAT CACTGAGCGA AAAGAATACG AGGCCGAAGC CCAGAAGCTC
GCCGAAGAGT ACGATGCTCT CTTGAACAAC GTTGAGGACG CCATATTTCT CCTCAATGTC
GAAGAGAACG GTGAGGATAT CCGGTTCGAA TTTGAACGCC TCAGTCCGTC TTACGAACGT
CAAACCGGCA TTAAGACCGA GGAAGTCCAA GGCCAGACAC CACGAGACGT ATTCGGTGAG
GAGCAAGGAG CTGAGTTAGA AGCGAACTAT CACCGCTGTG TCAACGCTGG CGAATCCATC
TCATATCAAG AGGAACTCCA GGTCGACGAA GGTGCACGTT TCTGGCAGAC GAAACTTGCA
CCGGTAGTTT CCGATGGAGA AATAATTCGC CTCGTTGGGA TCACTCGGAA CGTGACCGAC
CGCGTTGAAC GGGAGCGAAA ACTACGTCAG CAGAACGAGC GCCTTGACGA GTTTGCAAGC
GTTATTTCCC ACGACTTACG TAACCCGCTC AACATCGCAC ATGGTCGTGC AACGCTTCTC
GCAGAAGAAA CAGAAAATGA GCATCTCGAT CCACTGTTAC GAGCACTCGA TCGGATGGAA
ACAATCGTGG AGGACACGTT GACGCTTGCT CGTCAAGGCG ACACAATAAG CGATACCGAG
TCGATTCATT TGACTGACCT CGTCGGGAAG TGCTGGGCGA CCGTCGACAC AGATGACGCA
GCTATCGAGA TTGCCGATGA GACGACCATC CAAGGCGATC CCGACCGGTT ACGACACGTG
TTCGAGAACC TGTTCCGGAA CGCTGTTGAA CATGGTGGAT CTGATGTGAC TGTCCGCGTC
GGCTCTCTCG ATGAAGGGGG TATTTATATC GAAGACGATG GACCAGGAAT TCCAGTCGAA
AAGCGTGATG AAGTCCTTGA ACTGGGGCAT TCGTCGACAC GTGGTGGCAC TGGTTTTGGG
TTGACTATCG TAAAGCGAAT CGTAGAGGCC CATGGCTGGG AGTTGTCCAT AACCGATGGA
ACCGATGGTG GAGCACGGTT TGAGGTCGAG ATGGCTGAAC AGGGCGAACT CGTGTGA
 
Protein sequence
MEDGTTPREN KKYGPDWYRV LTEQIDDLIT VVDTDGTITY VSPAVTRILG YDPEELVGYE 
GYDFVHPEDR ERNADAIETV LSNPSTSETV EVRFRHANGS WRWIEATIRN RLDDDIIDGI
LLSSRDITER KEYEAEAQKL AEEYDALLNN VEDAIFLLNV EENGEDIRFE FERLSPSYER
QTGIKTEEVQ GQTPRDVFGE EQGAELEANY HRCVNAGESI SYQEELQVDE GARFWQTKLA
PVVSDGEIIR LVGITRNVTD RVERERKLRQ QNERLDEFAS VISHDLRNPL NIAHGRATLL
AEETENEHLD PLLRALDRME TIVEDTLTLA RQGDTISDTE SIHLTDLVGK CWATVDTDDA
AIEIADETTI QGDPDRLRHV FENLFRNAVE HGGSDVTVRV GSLDEGGIYI EDDGPGIPVE
KRDEVLELGH SSTRGGTGFG LTIVKRIVEA HGWELSITDG TDGGARFEVE MAEQGELV