Gene Hlac_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3597 
Symbol 
ID7402512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp349341 
End bp351104 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content52% 
IMG OID643710135 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002567701 
Protein GI222481465 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACAA AGACGATGCC GGAGTTGTTC TTTATTCACT CTGATCTAGA CATCGTCTAC 
GCGAACCCCA TGGCCTGTGC ACTTTTAGGG GCAGAATCCC CAGAGGAACT CACTGGCACT
CCACTTATCG ATCTCGTCAC GTCGGACTAC CGCTCACCAC TCCGGGAGCG CGTGGCCCAC
ATCTACGGTG GCGACGAACG CACCTCTGGA CTGAATGTTG AGTTGCAAAC GGATACTGAT
CAGCCACAAC GCGCCATCCT CGTGAGTTCG GTGGTCGAAT GGGACGACAC CGAGCGAGTA
CAAACGTCGG TGTTCCCGAT CAGAGAGACG GATGCAGACA GCGGTCAGCT TCTCTCCGAA
CAGGCCATGG ATCAAGCCCC CATCGGCATC ACGGTTTCAG ACCCATCTCA GCCCGACAAT
CCACTCATCC AAGTGAACGA TGGGTTCTGT ACGCTGACCG GATACGACCG CGAGGAATTC
CTCGGTCGGA ACTGTCGATT CCTCCAAGGT GAAGCCACAC GCGAGGAGAC AGTTGCGGAG
ATGGGAGCAG CGATCGAGGC CCAAGAGCCT GTCACTGTCG ATTTGCGAAA CTACCGCAAA
GACGGCTCGA TGTTCTGGAA TCGAGTCACG ACTATCCCGA TCCGGGATGA CTCTGGAACG
GTCTCGAACT TCCTCGGCTA TCAACAGAAC ATCACCAACG AGAAGCGATA CGAACAGGAT
CTCTCGTTGT TCAAAGTACA GTCTGAGCAG TCCGAAAAAG CAGTCGTGAT CACCGATTCG
GATGGAACGA TTCAGTACGT CAATCCTACC TTTGAGCGAG TGAACGGATA TTCCCCTGCT
GAGGCTATTG GTCGTACTCC TCGGATTCTT AAATCAAGTC AGCAGGATAA GGAGTTCTAT
ACGGAGTTGT GGGAGACGAT TACCGATGGC GATGTCTGGA AATCAGAGCT TGTCAACAAG
ACAAAATTCG GTGAGCTGTA CGAAGCGAAA CAGACAATCA CCCCAGTTAC GGATGAGAAA
GGCGACATAA CCCATTTCGT CGGAATGACA GAAGACATCA CTGAGGACGT GCTCACAAGA
CAGACGCTTG GTGTCCTGAA TCGTGTTATG CGACATAACT TGCGGAACGC GCTCAACGTA
ATCGATGGTC ACGCAGAGTT ATTGGAAGAC GGAGAGTTGG ACCCCAAGTC TCGTCGAGCG
TCAGTTATGG CAATTCGAGA GCAAGCTGCA TCAATGCAAA ATATCGGCGA GAAGACAGCA
GAGATTCGCT CAATTTGGGA TCGAGCCGAA ACTCACGAGA GGTGGGAGCA GCTTGATATA
GAGTCGCTTG TCGAAACGTA TCAAAGACAG TACCCGGATG TGAACATCAC CTGTACAAGT
GGAGATACCG GAGACATCCA CGTTCGGAAC ACAGAATTGT TCACGAATGC CATCGATGAG
GCTATCACGA ACGCAATCAA ACACACCGAG CAGCCCATAC CTGAAGTAGC GATCACGGTT
CAGCGTGACT TAGGTGCAGA TCAGTTTCGA ATAACTATCG CTGACAATGG ACCCGGAGTT
CCGGAACTCG AACGGCATGC AATCAACTCT GGTGAGGAAA CACCGCTTGG TCACAGTCTT
GGGATTGGGT TGTGGGTGAT GAAGTGGATT ACAACGACGC TCGGTGGAGA GTTGATAATT
ACGGATAACG ACCCTCAAGG AAGTGTGATA ACGTTTCAAT TGCCGGTCGG GAGCTCGAAT
GATGAGTTCA AACCTGAAAA GTGA
 
Protein sequence
MLTKTMPELF FIHSDLDIVY ANPMACALLG AESPEELTGT PLIDLVTSDY RSPLRERVAH 
IYGGDERTSG LNVELQTDTD QPQRAILVSS VVEWDDTERV QTSVFPIRET DADSGQLLSE
QAMDQAPIGI TVSDPSQPDN PLIQVNDGFC TLTGYDREEF LGRNCRFLQG EATREETVAE
MGAAIEAQEP VTVDLRNYRK DGSMFWNRVT TIPIRDDSGT VSNFLGYQQN ITNEKRYEQD
LSLFKVQSEQ SEKAVVITDS DGTIQYVNPT FERVNGYSPA EAIGRTPRIL KSSQQDKEFY
TELWETITDG DVWKSELVNK TKFGELYEAK QTITPVTDEK GDITHFVGMT EDITEDVLTR
QTLGVLNRVM RHNLRNALNV IDGHAELLED GELDPKSRRA SVMAIREQAA SMQNIGEKTA
EIRSIWDRAE THERWEQLDI ESLVETYQRQ YPDVNITCTS GDTGDIHVRN TELFTNAIDE
AITNAIKHTE QPIPEVAITV QRDLGADQFR ITIADNGPGV PELERHAINS GEETPLGHSL
GIGLWVMKWI TTTLGGELII TDNDPQGSVI TFQLPVGSSN DEFKPEK