Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3597 |
Symbol | |
ID | 7402512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012030 |
Strand | - |
Start bp | 349341 |
End bp | 351104 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643710135 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002567701 |
Protein GI | 222481465 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTACAA AGACGATGCC GGAGTTGTTC TTTATTCACT CTGATCTAGA CATCGTCTAC GCGAACCCCA TGGCCTGTGC ACTTTTAGGG GCAGAATCCC CAGAGGAACT CACTGGCACT CCACTTATCG ATCTCGTCAC GTCGGACTAC CGCTCACCAC TCCGGGAGCG CGTGGCCCAC ATCTACGGTG GCGACGAACG CACCTCTGGA CTGAATGTTG AGTTGCAAAC GGATACTGAT CAGCCACAAC GCGCCATCCT CGTGAGTTCG GTGGTCGAAT GGGACGACAC CGAGCGAGTA CAAACGTCGG TGTTCCCGAT CAGAGAGACG GATGCAGACA GCGGTCAGCT TCTCTCCGAA CAGGCCATGG ATCAAGCCCC CATCGGCATC ACGGTTTCAG ACCCATCTCA GCCCGACAAT CCACTCATCC AAGTGAACGA TGGGTTCTGT ACGCTGACCG GATACGACCG CGAGGAATTC CTCGGTCGGA ACTGTCGATT CCTCCAAGGT GAAGCCACAC GCGAGGAGAC AGTTGCGGAG ATGGGAGCAG CGATCGAGGC CCAAGAGCCT GTCACTGTCG ATTTGCGAAA CTACCGCAAA GACGGCTCGA TGTTCTGGAA TCGAGTCACG ACTATCCCGA TCCGGGATGA CTCTGGAACG GTCTCGAACT TCCTCGGCTA TCAACAGAAC ATCACCAACG AGAAGCGATA CGAACAGGAT CTCTCGTTGT TCAAAGTACA GTCTGAGCAG TCCGAAAAAG CAGTCGTGAT CACCGATTCG GATGGAACGA TTCAGTACGT CAATCCTACC TTTGAGCGAG TGAACGGATA TTCCCCTGCT GAGGCTATTG GTCGTACTCC TCGGATTCTT AAATCAAGTC AGCAGGATAA GGAGTTCTAT ACGGAGTTGT GGGAGACGAT TACCGATGGC GATGTCTGGA AATCAGAGCT TGTCAACAAG ACAAAATTCG GTGAGCTGTA CGAAGCGAAA CAGACAATCA CCCCAGTTAC GGATGAGAAA GGCGACATAA CCCATTTCGT CGGAATGACA GAAGACATCA CTGAGGACGT GCTCACAAGA CAGACGCTTG GTGTCCTGAA TCGTGTTATG CGACATAACT TGCGGAACGC GCTCAACGTA ATCGATGGTC ACGCAGAGTT ATTGGAAGAC GGAGAGTTGG ACCCCAAGTC TCGTCGAGCG TCAGTTATGG CAATTCGAGA GCAAGCTGCA TCAATGCAAA ATATCGGCGA GAAGACAGCA GAGATTCGCT CAATTTGGGA TCGAGCCGAA ACTCACGAGA GGTGGGAGCA GCTTGATATA GAGTCGCTTG TCGAAACGTA TCAAAGACAG TACCCGGATG TGAACATCAC CTGTACAAGT GGAGATACCG GAGACATCCA CGTTCGGAAC ACAGAATTGT TCACGAATGC CATCGATGAG GCTATCACGA ACGCAATCAA ACACACCGAG CAGCCCATAC CTGAAGTAGC GATCACGGTT CAGCGTGACT TAGGTGCAGA TCAGTTTCGA ATAACTATCG CTGACAATGG ACCCGGAGTT CCGGAACTCG AACGGCATGC AATCAACTCT GGTGAGGAAA CACCGCTTGG TCACAGTCTT GGGATTGGGT TGTGGGTGAT GAAGTGGATT ACAACGACGC TCGGTGGAGA GTTGATAATT ACGGATAACG ACCCTCAAGG AAGTGTGATA ACGTTTCAAT TGCCGGTCGG GAGCTCGAAT GATGAGTTCA AACCTGAAAA GTGA
|
Protein sequence | MLTKTMPELF FIHSDLDIVY ANPMACALLG AESPEELTGT PLIDLVTSDY RSPLRERVAH IYGGDERTSG LNVELQTDTD QPQRAILVSS VVEWDDTERV QTSVFPIRET DADSGQLLSE QAMDQAPIGI TVSDPSQPDN PLIQVNDGFC TLTGYDREEF LGRNCRFLQG EATREETVAE MGAAIEAQEP VTVDLRNYRK DGSMFWNRVT TIPIRDDSGT VSNFLGYQQN ITNEKRYEQD LSLFKVQSEQ SEKAVVITDS DGTIQYVNPT FERVNGYSPA EAIGRTPRIL KSSQQDKEFY TELWETITDG DVWKSELVNK TKFGELYEAK QTITPVTDEK GDITHFVGMT EDITEDVLTR QTLGVLNRVM RHNLRNALNV IDGHAELLED GELDPKSRRA SVMAIREQAA SMQNIGEKTA EIRSIWDRAE THERWEQLDI ESLVETYQRQ YPDVNITCTS GDTGDIHVRN TELFTNAIDE AITNAIKHTE QPIPEVAITV QRDLGADQFR ITIADNGPGV PELERHAINS GEETPLGHSL GIGLWVMKWI TTTLGGELII TDNDPQGSVI TFQLPVGSSN DEFKPEK
|
| |