| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3526 |
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| Symbol | |
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| ID | 7402369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012030 |
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| Strand | - |
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| Start bp | 271767 |
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| End bp | 273791 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643710064 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_002567630 |
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| Protein GI | 222481394 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG AGACAGATAA ACACAAACAA AGCGAGCGCA CACTCGCGGA CATCGAGCGG
ACTATTGATG AGAAGTTCCG CGATACCTAT ACGGAGGCCA TCTGGCAAAA AAGCCCTGTG
GAGTTGCTTC TGTATGGTGT AACAGTAATT TTCTTCTTCT ATCACCTCTG GTACTCTCTG
ACGTTCGCGA TTCCGGGCTC TCGTCACGGA ATCATTCACC TTGCGATGGT GCTCGGACTA
TGGGGCATCT TCCAGATGCT CAAGAGTGAC TGGAACACCC GTAAGGGTAA AGCCAAAACC
GTCGCGTACG CGCTATACAG CGTTATATCG GTCATACCGC TGTACATATT CCAGCGTGAT
TATCAGAGTA TCGTCCAGGC TGCGGGTATC TACAGCGACC AGCAGGCGTA CCTCGGAGTC
CTCGTCATCG TATTGGTCTT CATCGCACTG CTGCACATCT CCCGTCTCAT CAGCGGTATC
GTAGTGTTTG GACTCGTCTA CTCGTATTTC GGGTCCTACA TGCCGGGAAT TCTGGCCCAT
CGCGGGCTGA CCCCCCGTCG TATCATTACG ATGAACACGG TCGAGATGCA GGGACTGTTC
GGAACCCTCT TGCAGATATC TGCGACGTGG GTCGTCATCT TCCTGCTGCT GGCTGGGTTG
ATGGAGAAGT ACGGCGGTAT GGCGTCGTTC ATCAAGGGGA TGACGCGTAT CGCTGCTCGG
AGTAAGCGCG TCCAGATTGG ACAGGTTGCA GTCGCCGCGA GTATGTTTAT GGGGTCGATA
AACGGGTCGA CCGCAGCGAA CACCGCGACG ACTGGTGCGT TCACCATTCC GCTGATGAAA
GAGAACGGTT ACAGGGCGAA AATCGCCGCC TCCATCGAGG CAGTCGCCTC GTGTGGTGGA
CAGGTCCTTC CGCCTATCAT GGGCGCCGGG GCCTTCCTCA TGGCCGAACT CATCGAGCCA
AACTACGCTG AGATTGTCAT TGGTGCGGCC GCACCCGCAA TCCTGTTTTT CCTCACCGTT
GCTGTCGCCA TCTCGCTGAT TACGAGTAAG GACGTCTCGA TGGAGATCCA GGTCAACTCC
ACATCCGAAG GCTGGTGGAG CCGGATCAAA GGAGTCGCAG GCGCCTTCGA GTATATCGGG
ATGTTCGCCG TCTTGCTGTA CTGGCTCATC CCTGTCGGCG CCGACCCGAT GGTCGCTGGC
TTCTACGCCA TCGTCACGCT CGTCGGCCTC CGCCTGGTGC AGGTCGTACG AGGTATTGCC
CTGCAAGGAA AAGACATGCA GTCGGAGTTC AGGCTGTACC TGCGCGAGAG TCTCGAAGGT
ATCCGCCGCG GTGCAGAAGC GACCCTTGAT ATCACGATAC TACTCGCCAG TCTCGGCATC
GTCATCAGAG CGCTCATCGT CACTGGATTC GCTCAGCAGG TGTCGTCGTA TCTGGTGTCG
GTTGCTGGTG GCTCGGTCAT CATCATGCTG TTCCTGGCGA TGGCAGCGTC GATCGCCTTC
GGAATGGGGA TGTCGACGAC CGCAGCGTAC ATGATCGTGG CCGTGCTCGT CGCCCCGTCG
CTCGTCAACA TCGGCGTGCA GGCGTACACG GCACACATGT TCGTGTTCTA CTTTGCCATC
GTCTCGAACA TCACGCCGCC GATCGCACTG TCGGTGATCA TCGCTCAGGG GATATCCGGC
TCGGAGTTCT GGGAAACGGC CTTCGAGTCG CTTCGCATCG GGTTCCCGAT GTTCCTGCTC
CCCTTCTCGT TCTTCTACAA CGAGGCCCTG CTGTACCCGA GCGCGATGAC GCCAGTGATG
TTCGTCGTCG TCTTCGCCGG GTTCGTCGCG GTGAGTATCG GTCTCATCGG ACGCATCTCG
GAGGACATTC CCACGGTGCT CCGGCCAGTG TTCATCGGAC TCGGACTCGG TGCAATCTTC
CTCCCGACGA TCATCGGACA GGCGCTACTC GGAGTCGCCA TCTTCGCAGC CTTGGTCTAC
TTTGTCCGTC CCACTACGTT CGGGCTCGGA CAACCGGCCG AGTAA
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| Protein sequence | MSSETDKHKQ SERTLADIER TIDEKFRDTY TEAIWQKSPV ELLLYGVTVI FFFYHLWYSL
TFAIPGSRHG IIHLAMVLGL WGIFQMLKSD WNTRKGKAKT VAYALYSVIS VIPLYIFQRD
YQSIVQAAGI YSDQQAYLGV LVIVLVFIAL LHISRLISGI VVFGLVYSYF GSYMPGILAH
RGLTPRRIIT MNTVEMQGLF GTLLQISATW VVIFLLLAGL MEKYGGMASF IKGMTRIAAR
SKRVQIGQVA VAASMFMGSI NGSTAANTAT TGAFTIPLMK ENGYRAKIAA SIEAVASCGG
QVLPPIMGAG AFLMAELIEP NYAEIVIGAA APAILFFLTV AVAISLITSK DVSMEIQVNS
TSEGWWSRIK GVAGAFEYIG MFAVLLYWLI PVGADPMVAG FYAIVTLVGL RLVQVVRGIA
LQGKDMQSEF RLYLRESLEG IRRGAEATLD ITILLASLGI VIRALIVTGF AQQVSSYLVS
VAGGSVIIML FLAMAASIAF GMGMSTTAAY MIVAVLVAPS LVNIGVQAYT AHMFVFYFAI
VSNITPPIAL SVIIAQGISG SEFWETAFES LRIGFPMFLL PFSFFYNEAL LYPSAMTPVM
FVVVFAGFVA VSIGLIGRIS EDIPTVLRPV FIGLGLGAIF LPTIIGQALL GVAIFAALVY
FVRPTTFGLG QPAE
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