Gene Hlac_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3523 
Symbol 
ID7402366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp269546 
End bp270700 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID643710061 
Product3-ketoacyl-CoA thiolase 
Protein accessionYP_002567627 
Protein GI222481391 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC AAGTCGCCAT TATCGGTGGC TCTATGACGA AGTTCGGGGA GCGCGACGCC 
TGGGTCCGCG AGTTACTCGC GGAGGCGGGC GAAGCGTGCC TCGACGACGC CGGAGTTACC
CCCGACGACG TGGAACACGT GTACGTATCG AACATGGCAA GCGGTGAGTT CGAGGGACAG
ACGGGCATCA TGAACGCCCT CGCCCACGAC CTCGGACTCA TGCCCGCCTA CAGCCAGCGA
ATCGACCAGA CCAGTTCCAG TGGCGCGGCG GGTATCTACG GTGCCTGGCA GTCGGTCGCT
TCGGGCGCCA GCGACATGAC GCTACTCGTG GGCGGCGAGA AGATGACCCA CAAGGACACC
GCCGGGTCGA CGGAGGTTAT CGCGTCGATT ACGCATCCTG AAGAGTACAA GCACGGTGTC
ACTCTCCCCT CCTTTGCCGG GATGACAGCG CGGCTGTATC TCGACAAGTA CGATGCACCA
CGCGAGAGTC TCGCAAAAGT CGCTATCAAG AACCACAAAA ACGGCGTCGA CAATCCGAAG
GCACAGTTCC AGAAGGAGAT TGACATTGAG ACGGCGATGG AGAGCCCGAT TATCGCAGAC
CCGCTTCGGC TGTACGACTT CTGTCCCGTC ACGGACGGTA GCGCAGCGCT CATGTTCTGC
CCGGTCGATG TCGCCGAAGA GTACGCAGAC GACTACGTTG TCGTCTCTGG CGTCGGCGGC
GCGACGGACA CGCACGTCGT CCACGAGCGC GACGACCCCA CAACGATGGG CGGTGTCGTC
GAGTCCGGCC AGGAAGCATA CGAGATGGCG GGTCTGGGAC CGGACGACAT CGACGTGGCC
GAACTCCACG ATATGTTCAC CATCCTCGAG TTCCTCCAGA TGGAGGGACT TGACTTCGCC
GACGAGGGCG AGGCGTGGAA ACACATCGAG GACGGCCGAA CGGAGAAGGA CGGCGAGTTG
CCGATCAACA CGTCCGGCGG ACTGAAATCA AAGGGCCACC CACTGGGCGC ATCTGGCGTC
GCTCAAGGAT ACGAGATTTA CGAACAACTC ATGGGCGAAG CCGGTCCACG GCAGGTCGAC
GCTGATACCG GACTGGCCTG TAACGTTGGT GGTTTCGGCA ACTGTGTGAT TACGACTATC
ATGGAGGCGA ACTAA
 
Protein sequence
MSNQVAIIGG SMTKFGERDA WVRELLAEAG EACLDDAGVT PDDVEHVYVS NMASGEFEGQ 
TGIMNALAHD LGLMPAYSQR IDQTSSSGAA GIYGAWQSVA SGASDMTLLV GGEKMTHKDT
AGSTEVIASI THPEEYKHGV TLPSFAGMTA RLYLDKYDAP RESLAKVAIK NHKNGVDNPK
AQFQKEIDIE TAMESPIIAD PLRLYDFCPV TDGSAALMFC PVDVAEEYAD DYVVVSGVGG
ATDTHVVHER DDPTTMGGVV ESGQEAYEMA GLGPDDIDVA ELHDMFTILE FLQMEGLDFA
DEGEAWKHIE DGRTEKDGEL PINTSGGLKS KGHPLGASGV AQGYEIYEQL MGEAGPRQVD
ADTGLACNVG GFGNCVITTI MEAN