Gene Hlac_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3452 
Symbol 
ID7402298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp200641 
End bp201405 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID643709993 
ProductABC transporter related 
Protein accessionYP_002567559 
Protein GI222481323 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAG CGACCGATAT CGCACGGACG TACGGTGACG AGAACGTGCT CGAACAACTG 
TCCGTAACGG TCGACGCCGG CGAGGTCGTC GCCGTCATCG GGCCGTCGGG CGTCGGGAAG
ACCACGCTCC TGCGCACGCT CGCGCTCTTC GACGAACCCG AAGCGGGAAC CGTCGAATTC
GACGGGACGG ACGCGTGGGC GGTCGACGAC GACGAACGAC TCGGGCTCCG GCGACGCATC
GGGATGGTGT TCCAGGCGGC GAGCCTCTTC GACGCCTCGG TCGCCCGCAA CGTCGAATAC
GGCCTCCGGA TCCGTCGGTC GTGGCGCGAC CGCGTCCGGT CCGAACTCCA CTCGCTCGTT
CGCTCGAACG GTACCGCCGA CGCCGTCCGC GAATCCCTCG ACGTCGTCGG AATGGCCGAC
GAGATGGCGG CACACGCTGG GTCGCTATCG GGCGGCGAAG CCCAACGCGT ATCCTTCGCT
CGGGCACTGG CGTACGACCC GGACGTCCTG TTGCTCGACG AACCGACGTC CGACCTCGAC
CCCCGGAACA CCGCCGTCAT CGAGGACGCC ATCGCGGAAG CACGCGAACG TGGAATCGGC
GTCGTCGTCG CAACGCACGA CATGCATCAG GCCGAACGCG TCGCGGACCG AGTCGCGGTC
CTCCTCGCGG ACAGCATCAC CGAAGTCGCA CCGACGGACG TCATCTTCCA GAACCCATCC
GACGACCGCA CGAAGCAGTT CATCTCCGGC GAACTCGTCT ACTGA
 
Protein sequence
MLRATDIART YGDENVLEQL SVTVDAGEVV AVIGPSGVGK TTLLRTLALF DEPEAGTVEF 
DGTDAWAVDD DERLGLRRRI GMVFQAASLF DASVARNVEY GLRIRRSWRD RVRSELHSLV
RSNGTADAVR ESLDVVGMAD EMAAHAGSLS GGEAQRVSFA RALAYDPDVL LLDEPTSDLD
PRNTAVIEDA IAEARERGIG VVVATHDMHQ AERVADRVAV LLADSITEVA PTDVIFQNPS
DDRTKQFISG ELVY