Gene Hlac_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3412 
Symbol 
ID7402260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp161931 
End bp163139 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content58% 
IMG OID643709955 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_002567521 
Protein GI222481285 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC GGTCTGTCCT TGGAGTCCTC GCAAGCACCA GCCTCACTGG GATTGCGGGC 
TGTCTCGGGG ACAGCGGAAA CGACGGAGCC AAACCCGCCA CGACACCGAT CATGAACCGT
GAGGTTCCGA TTGGTGGCGA TATTGGCGGT GTGATTCCGC AATTTCAGGG CTCTCCCGAA
CATACAGGAA ATCTCGATGC AACAGGGCCG ACGGATGGAG TGACGACATA CTGGCGTCGG
ACACCCCATC GATACGACCA CTCCCAACCG GTCGTTGTTG ATGACCGGGT GTATGTCTCC
TTCGGGGGAA AACTCGTCCA ACTTGACCGT GCGACAGGGC AGCGCCAATG GATCACTGAT
GTCGGCCACG ACGGTTCTTC GACACCAGCA GTGTACGACG GGACGGTTTA CGTCACAGTT
TGGAACGGCG GGGAGAACGA AGACCGGGGA CTGGCGGCAG TCGACGCCGA CAGCGGTGAT
ATCACATGGC GAGCCCTCAC AGATGCCGAC ATAAACAGCT CACCAGCTGT GACCGAAGAC
GGTGTCTTGG TTGGTGGGGG CCTCGGGACC ACATCTGTGG CGGCGTTCGA TCACGACGGT
ACTGAGCGAT GGCGTCACAC CCTTGGTGAG TACGCTTCGA CGCCAGCGGT GACCGGTGAG
ACAGTCGTCT ACGGAGCGGG AACCCCTCAG GTCGTCAGCT ACGACGCCGT TTCGGGCGAA
CGACTCTGGC AGTTCGATAC CGATGGTGAG ACGACAGCGG CACCTACTAT TGCGGACAAT
CGTGTTGTGG TCGGTACGCA GGCCGGAACG CTGTACTCGC TGGACCTACA GGATGGATCT
AAAGACTGGA GTATTGACCT CCCGGGCTCT GTCCGTCGGT CAGTCGCTAT GGCTGAAAAT
CGCATTATCG TGCCGACCGG TGAGGGACTT ATCGCGGTCG ACACTGCGGG AAACAGAGAC
TGGACTGTCG ACACGAGTAC AAGGGCTACT GAACCGGTAA TTGCTGGAGA TGGTGTGTAT
TTCGGCGATA GACGGATATT GCGGGCACTT TCTCTGACTG ATGGCACAGA GTGGTGGTCC
TTTGAGACCC GTAATCGATC TTTCAGTGAC TTCGGTCTCG GAGGCATCCA GAGAGCGCCA
GCGATCACTA ATGGCATCGT GATCGTTGCC ACCCAGGCTG GTGATGTGTA TGCGCTGGGC
GAAAAATAA
 
Protein sequence
MNRRSVLGVL ASTSLTGIAG CLGDSGNDGA KPATTPIMNR EVPIGGDIGG VIPQFQGSPE 
HTGNLDATGP TDGVTTYWRR TPHRYDHSQP VVVDDRVYVS FGGKLVQLDR ATGQRQWITD
VGHDGSSTPA VYDGTVYVTV WNGGENEDRG LAAVDADSGD ITWRALTDAD INSSPAVTED
GVLVGGGLGT TSVAAFDHDG TERWRHTLGE YASTPAVTGE TVVYGAGTPQ VVSYDAVSGE
RLWQFDTDGE TTAAPTIADN RVVVGTQAGT LYSLDLQDGS KDWSIDLPGS VRRSVAMAEN
RIIVPTGEGL IAVDTAGNRD WTVDTSTRAT EPVIAGDGVY FGDRRILRAL SLTDGTEWWS
FETRNRSFSD FGLGGIQRAP AITNGIVIVA TQAGDVYALG EK