Gene Hlac_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3406 
Symbol 
ID7402255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp156847 
End bp157776 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content59% 
IMG OID643709950 
Productsite-specific recombinase 
Protein accessionYP_002567516 
Protein GI222481280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGTGGT GCGGCTGGTG TGTCAACGAA GGCTATCTTG AAGCACACTA CGCCCAGCGG 
GCCAGTGCGA CCGCGCCACT CCCTGATGAC GACGGTCGCA AGCCCGGTGA CCAGCAGGCT
TGGACCTCCG AGCAGCGTCA CGCACTTACC CGTCACGTCG ACGAACAAGC CCGTAATGCC
ATCGAGGCAC TCACTACACT CTCAGAGGAT GTCGACCCAC GTGAGAAGCA ACAAGCTAGA
TATACTGCCC TGAGAGCTGC CCGAGACCGA GCCTTGGTGT TCGTCCTAGC ATACACCGCC
GTTCGGGTCG GGGAACTTCT TCGGGACCCG AACGATCCGC GTCGACGTGG CGTCCGCTGG
GAGGAACTTT CGCTCGACGA CGGGAGTATG GACGTCTACC GGAAGAAACA GCAGTGGGAC
GCCGCGAGTC TCCCCGACCC GGTTATTACG CCGCTGCGGA GCTATCGCCA GCTGATGGAC
CCGCCGACAG AGCGTTGGCC GGTGTTTCCG ACGTTCGACC AACGGACACT CGCAGGGCTC
GTCCAGGATG AGCTAACTGA CCGAGGGGAA CGCTCGAAAG CAATTACTGA GTGTCGACAG
AAGTACGCTC GCGACCTACT GCTGGCGCTC GATAATGATA TTCGGCCACC GTCGATCACG
ACTGACGGTG CACGGTCGAT TCTTCAGCGG CTTTCAGAGG CTGCAAAGAT TGATATCGAC
CATCCGAAAC ACGACTACCT CGCGCCCCAC GGTGGCCGGC GTGGTATGGG TGAGGTCCTC
GTTCGCACGT TCGGGTATAC AGTCGCTGCC CGGTATCTCG ACAATTCAGA GGAGATGGTC
CGTGAGCGGT ATTCACATAT TGAGGCTGGG GAGTTAGGTG ATGTTGCTAC AGAAGCCCTC
AACGAGGTTG ATTCTCTGAA TCGTAGGTAA
 
Protein sequence
MTWCGWCVNE GYLEAHYAQR ASATAPLPDD DGRKPGDQQA WTSEQRHALT RHVDEQARNA 
IEALTTLSED VDPREKQQAR YTALRAARDR ALVFVLAYTA VRVGELLRDP NDPRRRGVRW
EELSLDDGSM DVYRKKQQWD AASLPDPVIT PLRSYRQLMD PPTERWPVFP TFDQRTLAGL
VQDELTDRGE RSKAITECRQ KYARDLLLAL DNDIRPPSIT TDGARSILQR LSEAAKIDID
HPKHDYLAPH GGRRGMGEVL VRTFGYTVAA RYLDNSEEMV RERYSHIEAG ELGDVATEAL
NEVDSLNRR