Gene Hlac_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3366 
Symbol 
ID7402221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp121150 
End bp122385 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content59% 
IMG OID643709917 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002567483 
Protein GI222481247 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACGC TCACGAAGAC GCTGGAACTG AAACTGGTAG AGCCGAACGC GCACAAGCGG 
AGAAAACTCC GCGAGACGCG AGAGGCGTAC CAACAGGCGC TTCACGACGC CTTCGACGCT
GGCTGTACCA CACAGACCGA AGCGAACGAC GTGGTGGTCA ACTACAAGCT GAGTGGATAC
GCAAAGAATG CGCTCAAGAA GTACGTCCCG CAACTCACGA CGACGTACAA CGCAGGCGAA
CTTCACGATG CCCACCCCGT CCGTTTCACG AACGAAGGGC TACGACTCGA CCACAAGCCC
GAGAACGCTA TCGAGTGGTA CGTCAAAATC CCGCACCACG AGGACTATCA CCTCTGGATG
CCAGCACAAC CGAATCCCGA ACAACGGGAC TGGTTGGAAG CGTTGAACGC GGGAGACGCC
ACGATGGGCG AGAGTCGGCT ATTCGAGCGG GACGGAACGT GGTATCTTCA CGTCACCGCA
ACCCGCGACG CAGAGGGCGG TTCCGAGGTG TCCGACGAAG AACGGACACC CATCGGTGTC
GATATTGGGG AAGCGTCGCT CGTCACGGTG TGTCACCGTG ACGACCACGG TTGCCCGACC
GCTCCCGAAC TATGGGCCGA CGAAGGGAAG ACCGTTCGTC GGCTCCGCAA GACCTACTTC
ACCGCCACGA GGCGACTTCA GACACGCGGT AGCGAACGTA TCGCGGAGTC CTTCGGTGAC
GACCTGTGGA ACCAGATAGA CGACGTGTTC CACCGCGTCA CCCGCGAAGT CGTGGACTAC
GCCGAGTCTG TCAAGAATCC CGTTCTTGTT CTGGAAAACC TGACGTACAT ACGGGAGTCG
ATGGACTACG GCGAGTACAT GAACCGCCGT CTCCACGGAT GGGGATTCGC CAAACTCCAC
GCGCAGATAC GATACAAAGC CGTCGAGAAG GGTATCCCCG TCAAGACGGT GAACCCTCGC
AACACCTCGA AAGAGTGTCA TGCGTGCGGT GAGGTAGGAT ACCGCCCACA ACAGGCGACG
TTCAAGTGTA CGAACGATGC GTGCTGGATG GGCGAGTACC AAGCGGACGT GAACGGAGCG
GTGAACATCG CAGACCGCTA CCTCAGCGGA GAGAGTCGTT TCAGAGAACA CGAGAACGAC
GATGACTCGG CTGAGGATGG GGGGCGTTTG ACCGCCCCAC AAGACAGCCA AGCCGATGCT
ACCAAGCAAG AGACGCTTGG AACGTATGCG TCTTGA
 
Protein sequence
MTTLTKTLEL KLVEPNAHKR RKLRETREAY QQALHDAFDA GCTTQTEAND VVVNYKLSGY 
AKNALKKYVP QLTTTYNAGE LHDAHPVRFT NEGLRLDHKP ENAIEWYVKI PHHEDYHLWM
PAQPNPEQRD WLEALNAGDA TMGESRLFER DGTWYLHVTA TRDAEGGSEV SDEERTPIGV
DIGEASLVTV CHRDDHGCPT APELWADEGK TVRRLRKTYF TATRRLQTRG SERIAESFGD
DLWNQIDDVF HRVTREVVDY AESVKNPVLV LENLTYIRES MDYGEYMNRR LHGWGFAKLH
AQIRYKAVEK GIPVKTVNPR NTSKECHACG EVGYRPQQAT FKCTNDACWM GEYQADVNGA
VNIADRYLSG ESRFREHEND DDSAEDGGRL TAPQDSQADA TKQETLGTYA S