| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3347 |
|---|
| Symbol | |
|---|
| ID | 7402202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012030 |
|---|
| Strand | + |
|---|
| Start bp | 100805 |
|---|
| End bp | 103441 |
|---|
| Gene Length | 2637 bp |
|---|
| Protein Length | 878 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643709898 |
|---|
| Product | adenine-specific DNA methylase |
|---|
| Protein accession | YP_002567464 |
|---|
| Protein GI | 222481228 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG ATAATAGTCG TCGACCTATC GAGATCTCGT TCCCGATCGA GGAAGTAAAC
GAAATTGCGT CGAAAGAGGG CCACGCTAAA CGGTACTACA GGCCTGTCTA CACGATGCAC
AAGTACTGGG CCAGGCGTCT GGGCTCGGTC TTCCGCACCA TGCTCCTGTA TTCCCTTGCG
GAGGATGAGA TCCATATCAA GGAGAACGGT CAGGAGAGTT TCGAGGAGCT GCCGGATGTC
GATTGGGACA ATCCAGAGGC CCTGTGGGAC TACTACTTGG AAGACGTCGA CTTCGGAGAT
AAAACTGTTC TCGACCCCTT CATGGGCGGA GGAACCACGA TTGTTGAGGC CCTACGGATG
GGCTGCAACG TCATCGGCAG CGATCTAAAT CCTGTCGCCT GGTTCACGGT GAAGAAGGAG
ATCGAATCCG TGGATATCGA TGATCTGCAG GAGGCCTACG ACGAAATTTA CGAATCTGTA
GGTGAGGAAA TCCTCGAGTA CTACCAGACT CCGTGTCCGG ACTGCGATAA CATGGCGGAT
GCGATGTACT ATTTCTGGGT TAAGGAGATC GAGTGCCTGA ACTGCGGCCA CGATGTCCCT
CTGTTCAAGG GCTATTACTT CGCTAACTCC CGTTCCTCCA ACGACAGCTA CAAGAATGTT
CTCTGCCCGG ACTGCTGGAC TGTCCAGCAG ACAGACGACC ATACTACGGA GACAACGTGC
GTGGACGACA GCTGCGGGAA TAAGTTCATG CCGAAGGAAG GGACTGCTTC AGGCCAGAAC
TATACCTGTC CTGATTGCGG TGTCCGGAGC AAAATCATTG ACGCTACGAA ACGCTTCGGG
AAACCTGACT CCCAGATGTA TGCGGTCGAG TACTACTGCA GTTCCTGTGA CGATAAAGGA
TACAAAGACC CCACTGACCA CGATTTAGAG CTCTACGAGA GCGCTGGCAA GGAATTAGAG
GAAGAATGGG ACGAACTGCC CATCCCAGAG CAGGACCGGT ACCAGGGTAG CAGTGACCGA
GCCTGGAACC ACGGCTACCA CAAGTACCAC GAGATGTTCA ACGACCGGCA ACTGTTGCTG
CTGGGCCGGC TCCTCAACGA GATCGACGAC ATCGAGGATC AGAACGTGAA GGAGTTCCTG
CTCACCACGT TCTCCGCTAT GCTGGAGTCG AACAACATGT TCTGCATGTA CAACCGGGTG
GCGAACAAGC TTGAGCCCAT TTATAACTAT AACACGATTA TCGCCCGCCA CACACCTGTT
GAAGGTAATA TATGGGGCAG TGAGTACGGT CGTGGCACGT TCAAGGGGAT GTTCGATAAG
ACGAAGGCCG CGAAGGAATG GTGTCAGAGC CCGGTCGAGA AATACATCGA CGAGGACGGG
AACTCTCAGG ATAAGCAGAT GCAGACTCCG GTAGATGGTG TCCTTGTGGA TGATGCCTCT
GCCCTCGGAG AGGAGGGGAA TGCCTTCCTA CGCTGTGGGA CCTCTGAGTA CCTGCCTATC
GAAGACAAAT CAGTAGATGC GATCATCACA GATCCTCCGT ACTACGACAA CGAGATGTAT
GCTGAGCTCT CGGACTTCTA TTACGTCTGG CTTCACGAGG TTCTCAGCGA CACCTACGAC
CACTTCCAAG GAGAACGTAC GCCGAAGAAG AGCGAGGCTG TTGTTGACCC GGCGAAGGAC
GTTGAGGACA AGAGAACCGA AGAGCACTAC ATTGAGACAC TGACCAACGT CTTCAACGAA
TCCCGTCGGA AACTGGCGGA CGACGGTATT ATGGCCTTCA CATTCCACCA CAAGGAGACA
GAGGCCTGGG GTTCAACCCT TCAATCCGTT CTCGATGCTG ACTTCTACAT CAGTGCTCTC
TACCCTGTGA ATAGCGAGAC TCGAGGAGGT ACCAGGCACG GCAGAGCAAC CGTCGACTAC
GATACTATCA TCGTCTGCAG GAAACGCCAA GAAGACCCAG AAGAGGTCTC TTGGAAGTCA
CTTGAGGACG ATATCTACTT CCGGGCAGAG GATGAGATCG ATCGTCTGGA ACAAGCAGGT
CGCCGTCTGA CCGGGGGAGA TATCTTCGTA GTGGCGATGG GGAAATGCCT GGAAATTTTC
TCGAAACACT ACCCGAATGT CACCCGTGAC GGAGAACAGA TGGACGTGGT TGAGGCAGTT
GATGCCATCA AAGAGATTGT CGACGAGCAG CTGCTTGAAG AACGGTTCCA GATCTTGAGC
GAGGAGATGG ATCCTCTCAG CGCAGTCTAC CTGACCCATA TCTTAGGCCG GGGTGAGGAG
TTATCGTTCA ACGCTTTGAA CAAGGATCTC CGGCAGAGAG GGGTCGACGT AGCCGAACTG
GTCCACGAAG ATCTGTTAGA GCAGGAAGGA GACGACCTGG TCATCCTAGA TCCTCTTGAA
CGGGCTGACC GCTTGGAGAA CAAAAACAAG CCACTGTCGA TTGACAAGGC TCACTACCTG
TACTACCTCT TTGAGACCGA CCAGTTAGCG AAGAAGTTCG GGAAATGGAC GGATGAAGGA
GCGATTAACG CCCTCCGCAG GCTCTCGGAA ATAGAGGGAG ACGATGACTA TGATGATATC
GCGAAGTACG TGAAGGAGCA ATCGGACACC CAGCTGGAGA TCGAGGACTT CAGCTGA
|
|---|
| Protein sequence | MSKDNSRRPI EISFPIEEVN EIASKEGHAK RYYRPVYTMH KYWARRLGSV FRTMLLYSLA
EDEIHIKENG QESFEELPDV DWDNPEALWD YYLEDVDFGD KTVLDPFMGG GTTIVEALRM
GCNVIGSDLN PVAWFTVKKE IESVDIDDLQ EAYDEIYESV GEEILEYYQT PCPDCDNMAD
AMYYFWVKEI ECLNCGHDVP LFKGYYFANS RSSNDSYKNV LCPDCWTVQQ TDDHTTETTC
VDDSCGNKFM PKEGTASGQN YTCPDCGVRS KIIDATKRFG KPDSQMYAVE YYCSSCDDKG
YKDPTDHDLE LYESAGKELE EEWDELPIPE QDRYQGSSDR AWNHGYHKYH EMFNDRQLLL
LGRLLNEIDD IEDQNVKEFL LTTFSAMLES NNMFCMYNRV ANKLEPIYNY NTIIARHTPV
EGNIWGSEYG RGTFKGMFDK TKAAKEWCQS PVEKYIDEDG NSQDKQMQTP VDGVLVDDAS
ALGEEGNAFL RCGTSEYLPI EDKSVDAIIT DPPYYDNEMY AELSDFYYVW LHEVLSDTYD
HFQGERTPKK SEAVVDPAKD VEDKRTEEHY IETLTNVFNE SRRKLADDGI MAFTFHHKET
EAWGSTLQSV LDADFYISAL YPVNSETRGG TRHGRATVDY DTIIVCRKRQ EDPEEVSWKS
LEDDIYFRAE DEIDRLEQAG RRLTGGDIFV VAMGKCLEIF SKHYPNVTRD GEQMDVVEAV
DAIKEIVDEQ LLEERFQILS EEMDPLSAVY LTHILGRGEE LSFNALNKDL RQRGVDVAEL
VHEDLLEQEG DDLVILDPLE RADRLENKNK PLSIDKAHYL YYLFETDQLA KKFGKWTDEG
AINALRRLSE IEGDDDYDDI AKYVKEQSDT QLEIEDFS
|
|---|
| |