Gene Hlac_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3330 
Symbol 
ID7402186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp81015 
End bp81812 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content56% 
IMG OID643709882 
ProductCRISPR-associated protein Cas5, Hmari subtype 
Protein accessionYP_002567448 
Protein GI222481212 
COG category 
COG ID 
TIGRFAM ID[TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAT CCATCAACGC CAGCGGCGTG CCTGATACTT GCCTTTCGTT GACCGTCCGG 
TCGACATGGG GGCATTTCAA GCGCGTCGGG CGTAGTGTTA CGAAACAAAC CTATCGGATA
CCACCACGGA CTACTGTCGC TGGGATGCTC GCAGCTATCG TCGGCAGCGA CCGAGACTCG
TACTACGATG TCTTTGGAGC TGATACATCC GCTATCGCCA TCACGCCGTT ATTTGATATC
CGAACCGTCA ATGTTCCAAC AACCGGGTTA GGGACGGATC CAAAACAGGC AGTGACGAAG
ACAGCAGGGA GTCGACGGAG TTACGCACTC ACATATCAGG ATACGGAGGG CGACCGACAA
ATACACGCGT ACGAGCTGCT CACCGATCCG GTATATCGTA TCGACGTAGC TGTTGAAGAC
GAAGCCTACT ACGAGAAACT CGAACGTCGA CTCGATAACG AGGAGTCCTA CTACCCGCCG
AGCCTTGGCA AGTCCGAGTA TCTCTGTACG GTTGAAGACG TCGAGACCGA CGTTTCGCCA
ACGGAGCTTG CTGAGGCCGA GCAGTACGAT GTCGACTCGG TCGTTCCGGG TTCACTGTCC
GAGGTAATCC CACAACAGGG AGTTACCTAC GACATCGAAC GCTCACCGGC AGTCATGGAG
GCGACCCTTG GCGGACGGAA AACGACACGT TTCGACGACT ACGTGTATAC ACGCTCAGCT
GATACGCCCG TTCGAGTTGG CTCTACGGCA GATGTAACAC CGGTGTCGGT CGGTGATCGA
ACAGTCGTCT TCCGGTAA
 
Protein sequence
MTPSINASGV PDTCLSLTVR STWGHFKRVG RSVTKQTYRI PPRTTVAGML AAIVGSDRDS 
YYDVFGADTS AIAITPLFDI RTVNVPTTGL GTDPKQAVTK TAGSRRSYAL TYQDTEGDRQ
IHAYELLTDP VYRIDVAVED EAYYEKLERR LDNEESYYPP SLGKSEYLCT VEDVETDVSP
TELAEAEQYD VDSVVPGSLS EVIPQQGVTY DIERSPAVME ATLGGRKTTR FDDYVYTRSA
DTPVRVGSTA DVTPVSVGDR TVVFR