Gene Hlac_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3328 
Symbol 
ID7402184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand- 
Start bp77515 
End bp78084 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID643709880 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_002567446 
Protein GI222481210 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGA ATCACGATCC CGGCAGCGAG GAACTGATAT CGGAGTTTAT TGAGCGTGAA 
CGTGCACCAC ATCGTGAGCC TCGTGTTCGG GTAACTGGGC TGCTAGTCCA GTACTATCAC 
GTCTGTAAAC GCGAACTCTG GTTTACCTCG CGGGGAATCG ATATCGACCG CAGCGCAGCG 
AACATCCGAC GCGGAACACA CATCGATGAG ACCAGCTATC GTGATAACCG CCGGTCATTC 
CAAATAAACG GTCGAATCGC ACTCGATATG CTCGATTCCG GTGAGGTGAT GGAGGTCAAA 
GCCTCGTCGA CGCTGGAAAA ACCTGCGCGG ATGCAGTTGC TTTACTACCT CTGGTATCTC 
GACCGAATCC TCGACATCCA ACGGGACGGT GTACTGGCGT ATCCTGCCGA ACGAACACGC 
GAGGAGGTCA GCCTCACCGA GGACAACGCA GCCGCCGTCG AGGAAACGAT CCGTGGCATC 
ATCGACGTAG TCGAGAGCGA TAGTCCACCG ACACTCGACA AAAAACCATA CTGCGATTCC 
TGTTTGTACC AAGACATCTG TTGGCTCTAA
 
Protein sequence
MTQNHDPGSE ELISEFIERE RAPHREPRVR VTGLLVQYYH VCKRELWFTS RGIDIDRSAA 
NIRRGTHIDE TSYRDNRRSF QINGRIALDM LDSGEVMEVK ASSTLEKPAR MQLLYYLWYL 
DRILDIQRDG VLAYPAERTR EEVSLTEDNA AAVEETIRGI IDVVESDSPP TLDKKPYCDS 
CLYQDICWL