| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3306 |
|---|
| Symbol | |
|---|
| ID | 7402566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012030 |
|---|
| Strand | + |
|---|
| Start bp | 49104 |
|---|
| End bp | 49517 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643709861 |
|---|
| Product | deoxyribonuclease/rho motif-related TRAM |
|---|
| Protein accession | YP_002567427 |
|---|
| Protein GI | 222481191 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3269] Predicted RNA-binding protein, contains TRAM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAT CTGAGCAACT CAACTGTTTG TTTTCAGCAG CCGTCAAGGA GACAGCAGAT
ACGTACGTGA TCGAAGTTCC ACACGAGGAG GTCACTGAGG GGTTTGTCGA CAAAGAGGAG
ATCCATCAGG TTGCACTGTT GTCGACCGGA AGGTCATCTG TAGGGAGAGA ATCATCCGGT
AGCTCTCAGG AAGACGGAGA GATCCAGGAC CCACCGGTAA GTGAAGGAGA CAAGCGGATA
GTCGAGATAT CAGAGACGGG TGATCAGGGT GATGGACTCA CACGTGTGGA ACGTGGATTT
GTGGTGATCG TTCCTGGTGC ACAGGTGGGC GACCGTGTTC GAATATACAT AGAGACGGTC
CGTGATACCG TTGCATTCGG GGAAGTTGTA GAACGGCTTG ATTACGAGAA CTGA
|
|---|
| Protein sequence | MEISEQLNCL FSAAVKETAD TYVIEVPHEE VTEGFVDKEE IHQVALLSTG RSSVGRESSG
SSQEDGEIQD PPVSEGDKRI VEISETGDQG DGLTRVERGF VVIVPGAQVG DRVRIYIETV
RDTVAFGEVV ERLDYEN
|
|---|
| |