| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2726 |
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| Symbol | |
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| ID | 7401337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2717354 |
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| End bp | 2719078 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709801 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002567367 |
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| Protein GI | 222481130 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.650168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCG GGGGGAACCG TTTATGCGGG CGCTTGGGAG AGCCCCACGT AGAAATGACG
GGACTTCGAG GGCTGCTCCG ACGCGCGTTC GGTCGGGACC GGAACTCGCG ATCGGTCCCG
GACGGCGGGG TCGTCGTGAG TGACTCCGCC GATGCGGGAT TGTCGGGTGA CGCCCCCGGC
GACGCGGCCG AGACGGAGAC GGGCACAGCC ACGAGCGAGG GCGAGGAGTA CACCATTGCG
GAGGCGGAGG GCGTCGATCG CGCCGAGACC CTCGCCGCCG CGGGCTTCGA GCAGGTGTTC
AACGCCACCG GCGTCCCGAC GTTCATCCTC GATAGCGAGG GGAACGTCGC CGAGTGGAAC
GAGTCCATCG CGTCGCTCAC CGGGAACGAG CGTGAGGACG CGGTCGGCCA CGCCCACGTC
TCGGAGCTGT TCTACCCCGA CGGGCGGCGG GCCGACACCC TCGCCGACAA GGTGCTCGAC
GCGCCGGAGA CCGCCGACGA GGTGTACGGC GTCGAGCGCT GCGACTCGGC GCAGACCCGC
TACCGCGACA CCAGCGCGAT GGTCGACCGC CACGGCGACG AAAAGCACAT CGAGTTCACG
GCGGCGCCGC TGTACGAAGG CGACGACCTC GTCGGCGTGA CGGAGGTCGT CATCGACCGG
ACGGAGAACA TCAACCAGCG CAACGCGACC GAGGCGCTCG TCGCCGAGGT CCGCGAGACG
GCGGAGGCGA TCGGCGAGGG AGACCTCGAC GCACGCGCGG CCCGTCGCGA GGAGTGCGAG
ATCCTCGACG AGGAGCTGTT GAGCGTCATC GGCGTCGTCA ACCAGATGGC GGAGAACCTC
CAGGACCTCT CTGAGGGCGT TCACGAGCAG GCCCGCGAGA TCGACCGAAC GGTCCAGAAG
GCCAGCACCG CGGCCGCGAA CATCGCGGAG AACGTCGACG AGCAGAACGA ACTCCTCGAA
GAGAGCGTCT CCGAGATGCA GTCCTTCTCG GCCGGAATGG AGGAGGTCGC CGCGACCGCC
GATCAGGTCG ACTCGGCCGC GGTCGCCGCC AGCGAAGCGG CAGACGAGGG GCTCGACGCC
AGCGAGGACG CCCGCGAGGC GACCGAGGAC GTGGTCGATA TCGGCGACGA ACTCGTCGAG
AGCGTCGGCG CGCTCTCCGA ACGCATGGAC GACATCGAGG AGGTCATCGA GGTCATCTCC
GACGTGGCCG AGCAGACGAA CCTGCTCGCG CTCAACGCGA ACATCGAGGC CGCCCGCGCC
GGCGAGGGCG GGGACGGCTT CGCGGTCGTC GCCGAGGAGG TGAAGAAGCT CGCCGACGAG
ACCCGCGGCT ACACCGAGGA GATCACGGAG AGCCTCGCGG AGCTGCAGGC GCAGTCGGAC
GAGACGAGCA CCGCCGTCGA GCGCTCGCAC GAGCGGATCG AGGACGCCGG CACCGAGATC
GAGACGGTAC TCGACTCGCT CGAAGAGATC GCGGACGCGG TCGACGAGGC CGCCGCCGGC
GTCGCCGAGG TCGCCCGAAC CACCGACGAC CAGGCCGCCA CCGTGGAGGA GCTCACCTCG
TCGCTGGAGG CGGTCCGAGA GCGCTCTGAT CGTACCGAGG ACGCGACCGA GCGCATCGTC
GACGCCACCG ACGACCAGGA AGTCGCCGTC GACGAACTGA TCACCCGCGT CGAGCGGCTG
GACGCGAGAC AGGAGCGGAA GCGGGAGCGA GAGCAGCCGC AGTAG
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| Protein sequence | MNSGGNRLCG RLGEPHVEMT GLRGLLRRAF GRDRNSRSVP DGGVVVSDSA DAGLSGDAPG
DAAETETGTA TSEGEEYTIA EAEGVDRAET LAAAGFEQVF NATGVPTFIL DSEGNVAEWN
ESIASLTGNE REDAVGHAHV SELFYPDGRR ADTLADKVLD APETADEVYG VERCDSAQTR
YRDTSAMVDR HGDEKHIEFT AAPLYEGDDL VGVTEVVIDR TENINQRNAT EALVAEVRET
AEAIGEGDLD ARAARREECE ILDEELLSVI GVVNQMAENL QDLSEGVHEQ AREIDRTVQK
ASTAAANIAE NVDEQNELLE ESVSEMQSFS AGMEEVAATA DQVDSAAVAA SEAADEGLDA
SEDAREATED VVDIGDELVE SVGALSERMD DIEEVIEVIS DVAEQTNLLA LNANIEAARA
GEGGDGFAVV AEEVKKLADE TRGYTEEITE SLAELQAQSD ETSTAVERSH ERIEDAGTEI
ETVLDSLEEI ADAVDEAAAG VAEVARTTDD QAATVEELTS SLEAVRERSD RTEDATERIV
DATDDQEVAV DELITRVERL DARQERKRER EQPQ
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