Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2711 |
Symbol | |
ID | 7401322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2701414 |
End bp | 2703267 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643709786 |
Product | carbon starvation protein CstA |
Protein accession | YP_002567352 |
Protein GI | 222481115 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACG TAATCTGGAT TGTAGTTGCC GTGCTCGGCA CGTTCACCGT TGGGTATATG GGGTACTCGC GGTACCTTTC GCGGTTCGTC GAAATCGACG ACGAGCGGGA GACGCCAGCA CACAAGTACG AAGACGGACA GGAGTACGTA CCGGCGAAGA AGCCGGTGCT ACTGGGGCAT CACTTCTCGA GTATTGCGGG CGGCGCGCCG ATCGTCGGCC CGATCACGGC GGGGGCCATC TGGGGGTGGG TCCCCGCGCT GCTGTGGGTC GCCATCGGCA ACCCACTGAT GGGGGCGGTT CACGACTTCA TCTCGCTGTC CGGCTCGATG CGACACGAGG GGAAGTCCAT CGGCTACATC ATCGGCGAGT ACGTCGGCGA GCGCGGGAAG GACATGCTGC TGTGGTTCGC CTTCCTCACC ATCATCCTCG TGGTGGCGGT GTTCGCGCTC GTCGTCGGTA TCGTTCTGAA CGCCTACCCG TCGGCGGCGA CCGCGAGCTT CGTATACATC GCGCTCGCGT TCGCCTTCGG CGTCTACCTC TACCAGCTTG ACGGCCCATT CATCCCGGGT ACGGTCGTGT TCGTCGCCGG CGTGTTCGCC GGCGTCTGGC TCGGCATCCA ATACCCGTTC GCGCTGTTCG AGCTGGCGGG CGACGCCTCG CACACCGCGG GCACGTTCGT CCTCTTCAGC AGCACTGGCT CTTGGGTGCC CGGCGCGGGC GCCCTCGGCG GCAACACCGC CGCCTGGGTC CCGGTGATTC TGGTGTACGC GGCCCTGGCC AGCGCCCTCC CGGTGTGGGT GCTGCTCCAG CCGCGTGACT ACCTCTCGTC GTTCCTGCTG TACGCAGGCG TCGGCGGTGC GCTGCTCGCC ATTATTGTCG GCACCATCTT CAACACGTCC ACCGAGCCGC TCGTGGTCGC CGACAGCATC GAACCGTTCA CCGGATTCTT GGGGGTCGAG AGCGTCGCCC CGTTCCCGTT GTTCCCGATG TTGTTCGTCA CCATCGCCTG CGGGACGATC AGTGGGTTCC ACTCGCTGGT CTCCTCCGGG ACGACCGCGA AGCAGCTGAA CAAAGAGAGC GACGCGCGCC TCATCGGCTA CGGCGGCATG CTCGGTGAAG GCCTTCTCGC CGCCGTCGCG CTGTCAACGC TCGCGGTTGC CGGCGTCGCG TCCGACGCGG CAGCCGGCGG CATCGGTGGC GCCCTGCCCA ACTTCGCGGC GGGCGGCGGC ACCATCCTCA CTAGCCTCGG TCTCCCCGCC TCCTACGGCG CGCCGTTCAT GGCGCTGGTG CTCGTGAGCT TCCTGCTGAC CTCCACCGAC ACGGCCGCAC GGCTCGGCCG CTACATGATG GAGGAGATCG TCGGCCCTCA GAGCAGCGGC TCCGAGACTG GCCTCTCCGG GGGCATCGGT TCGTTCGCTC GCGGCCGATA CACGAATCCT GTCGTCCAGT GCGGCATCGC GTACCTGCTC GTTATCTCCG GTGAGTGGGC GACGCTATGG ACGCTGTTCG GCGGCGCCAA CCAGTTACTC GCCGCGCTCG CGCTGTTGAC CGGCACGGTC TGGCTCGCCA ACTGGGACGA TTCCAAGCAG CTCGTCAGCA CCGGTGTCCC GATGGCCCTC ATGGTCGTCG TCACCGTGCT CGGGCTGTCC TGGGTCGCCT TTAAAGAGCA GCTCTACGAT CAGCTGATCC AGGGTGGCGC GCAGGGAATC GGCGCTCAGG TGTCGGCCGG CGTGCGCGTC CTGCTCGCCG TGCTGCTGAT CTACCTGGCG CTGTCGCTGG TGCGTATCGG CTACGACAAC ATCACGAACG TGCGAAGCGG AAGCGAGCCG GCGGCCAAAC CGAGCGACGA CTGA
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Protein sequence | MTNVIWIVVA VLGTFTVGYM GYSRYLSRFV EIDDERETPA HKYEDGQEYV PAKKPVLLGH HFSSIAGGAP IVGPITAGAI WGWVPALLWV AIGNPLMGAV HDFISLSGSM RHEGKSIGYI IGEYVGERGK DMLLWFAFLT IILVVAVFAL VVGIVLNAYP SAATASFVYI ALAFAFGVYL YQLDGPFIPG TVVFVAGVFA GVWLGIQYPF ALFELAGDAS HTAGTFVLFS STGSWVPGAG ALGGNTAAWV PVILVYAALA SALPVWVLLQ PRDYLSSFLL YAGVGGALLA IIVGTIFNTS TEPLVVADSI EPFTGFLGVE SVAPFPLFPM LFVTIACGTI SGFHSLVSSG TTAKQLNKES DARLIGYGGM LGEGLLAAVA LSTLAVAGVA SDAAAGGIGG ALPNFAAGGG TILTSLGLPA SYGAPFMALV LVSFLLTSTD TAARLGRYMM EEIVGPQSSG SETGLSGGIG SFARGRYTNP VVQCGIAYLL VISGEWATLW TLFGGANQLL AALALLTGTV WLANWDDSKQ LVSTGVPMAL MVVVTVLGLS WVAFKEQLYD QLIQGGAQGI GAQVSAGVRV LLAVLLIYLA LSLVRIGYDN ITNVRSGSEP AAKPSDD
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