Gene Hlac_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2711 
Symbol 
ID7401322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2701414 
End bp2703267 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content66% 
IMG OID643709786 
Productcarbon starvation protein CstA 
Protein accessionYP_002567352 
Protein GI222481115 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG TAATCTGGAT TGTAGTTGCC GTGCTCGGCA CGTTCACCGT TGGGTATATG 
GGGTACTCGC GGTACCTTTC GCGGTTCGTC GAAATCGACG ACGAGCGGGA GACGCCAGCA
CACAAGTACG AAGACGGACA GGAGTACGTA CCGGCGAAGA AGCCGGTGCT ACTGGGGCAT
CACTTCTCGA GTATTGCGGG CGGCGCGCCG ATCGTCGGCC CGATCACGGC GGGGGCCATC
TGGGGGTGGG TCCCCGCGCT GCTGTGGGTC GCCATCGGCA ACCCACTGAT GGGGGCGGTT
CACGACTTCA TCTCGCTGTC CGGCTCGATG CGACACGAGG GGAAGTCCAT CGGCTACATC
ATCGGCGAGT ACGTCGGCGA GCGCGGGAAG GACATGCTGC TGTGGTTCGC CTTCCTCACC
ATCATCCTCG TGGTGGCGGT GTTCGCGCTC GTCGTCGGTA TCGTTCTGAA CGCCTACCCG
TCGGCGGCGA CCGCGAGCTT CGTATACATC GCGCTCGCGT TCGCCTTCGG CGTCTACCTC
TACCAGCTTG ACGGCCCATT CATCCCGGGT ACGGTCGTGT TCGTCGCCGG CGTGTTCGCC
GGCGTCTGGC TCGGCATCCA ATACCCGTTC GCGCTGTTCG AGCTGGCGGG CGACGCCTCG
CACACCGCGG GCACGTTCGT CCTCTTCAGC AGCACTGGCT CTTGGGTGCC CGGCGCGGGC
GCCCTCGGCG GCAACACCGC CGCCTGGGTC CCGGTGATTC TGGTGTACGC GGCCCTGGCC
AGCGCCCTCC CGGTGTGGGT GCTGCTCCAG CCGCGTGACT ACCTCTCGTC GTTCCTGCTG
TACGCAGGCG TCGGCGGTGC GCTGCTCGCC ATTATTGTCG GCACCATCTT CAACACGTCC
ACCGAGCCGC TCGTGGTCGC CGACAGCATC GAACCGTTCA CCGGATTCTT GGGGGTCGAG
AGCGTCGCCC CGTTCCCGTT GTTCCCGATG TTGTTCGTCA CCATCGCCTG CGGGACGATC
AGTGGGTTCC ACTCGCTGGT CTCCTCCGGG ACGACCGCGA AGCAGCTGAA CAAAGAGAGC
GACGCGCGCC TCATCGGCTA CGGCGGCATG CTCGGTGAAG GCCTTCTCGC CGCCGTCGCG
CTGTCAACGC TCGCGGTTGC CGGCGTCGCG TCCGACGCGG CAGCCGGCGG CATCGGTGGC
GCCCTGCCCA ACTTCGCGGC GGGCGGCGGC ACCATCCTCA CTAGCCTCGG TCTCCCCGCC
TCCTACGGCG CGCCGTTCAT GGCGCTGGTG CTCGTGAGCT TCCTGCTGAC CTCCACCGAC
ACGGCCGCAC GGCTCGGCCG CTACATGATG GAGGAGATCG TCGGCCCTCA GAGCAGCGGC
TCCGAGACTG GCCTCTCCGG GGGCATCGGT TCGTTCGCTC GCGGCCGATA CACGAATCCT
GTCGTCCAGT GCGGCATCGC GTACCTGCTC GTTATCTCCG GTGAGTGGGC GACGCTATGG
ACGCTGTTCG GCGGCGCCAA CCAGTTACTC GCCGCGCTCG CGCTGTTGAC CGGCACGGTC
TGGCTCGCCA ACTGGGACGA TTCCAAGCAG CTCGTCAGCA CCGGTGTCCC GATGGCCCTC
ATGGTCGTCG TCACCGTGCT CGGGCTGTCC TGGGTCGCCT TTAAAGAGCA GCTCTACGAT
CAGCTGATCC AGGGTGGCGC GCAGGGAATC GGCGCTCAGG TGTCGGCCGG CGTGCGCGTC
CTGCTCGCCG TGCTGCTGAT CTACCTGGCG CTGTCGCTGG TGCGTATCGG CTACGACAAC
ATCACGAACG TGCGAAGCGG AAGCGAGCCG GCGGCCAAAC CGAGCGACGA CTGA
 
Protein sequence
MTNVIWIVVA VLGTFTVGYM GYSRYLSRFV EIDDERETPA HKYEDGQEYV PAKKPVLLGH 
HFSSIAGGAP IVGPITAGAI WGWVPALLWV AIGNPLMGAV HDFISLSGSM RHEGKSIGYI
IGEYVGERGK DMLLWFAFLT IILVVAVFAL VVGIVLNAYP SAATASFVYI ALAFAFGVYL
YQLDGPFIPG TVVFVAGVFA GVWLGIQYPF ALFELAGDAS HTAGTFVLFS STGSWVPGAG
ALGGNTAAWV PVILVYAALA SALPVWVLLQ PRDYLSSFLL YAGVGGALLA IIVGTIFNTS
TEPLVVADSI EPFTGFLGVE SVAPFPLFPM LFVTIACGTI SGFHSLVSSG TTAKQLNKES
DARLIGYGGM LGEGLLAAVA LSTLAVAGVA SDAAAGGIGG ALPNFAAGGG TILTSLGLPA
SYGAPFMALV LVSFLLTSTD TAARLGRYMM EEIVGPQSSG SETGLSGGIG SFARGRYTNP
VVQCGIAYLL VISGEWATLW TLFGGANQLL AALALLTGTV WLANWDDSKQ LVSTGVPMAL
MVVVTVLGLS WVAFKEQLYD QLIQGGAQGI GAQVSAGVRV LLAVLLIYLA LSLVRIGYDN
ITNVRSGSEP AAKPSDD