Gene Hlac_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2700 
Symbol 
ID7400907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2692008 
End bp2693180 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID643709774 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_002567341 
Protein GI222481104 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.484664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTGCG ACCGGACGCA CACATCCGCC GGCAGCTTAT GTTTCCGACG GCGGTACGTG 
AACGCGATGA CTGACGATCC TCTCTTCGAC GAGTTCGAAC TGAGCGGCCA CGTTCTCGAC
AACCGCGTCG GTCTCGCACC GATGACGCGG ACGAGCGCGA CCGACGCGGG ACACGCGACC
GACCGAATGG CCCGATACTA CGCCTCCTTC GCTCGCGGCG GGTTCTCGTT TCTCGTCACC
GAGGGCGTCC ACCCGGACGC CACCCACAGC CAGGGCTACC TCAATCAGCC CGGCCTCGCG
ACCGACGAGC AGGCGGCGGC CTGGGAGCGA GTCGTCGACG CCGTCCACGA GGAGGGCAGC
CCGATCTTCG CGCAGTTGAT GCACGCCGGG GCACAGGCAC AGGGCAATCG ATACGGGTAC
GATCCCGTCG CGCCTTCGCC GTACCGCCCG CCGGGAGAGA TGGCGGAGCT GTACGGCGGG
TCCGGAGCGT TCCCCGAGGC GGACCCACTC GACGACGAGG GGCTCGACGA AGCGAGAGAG
GGATTCGTCG CCGCCGCGGA GCGCGCGGTC GAGGCCGGTT TCGACGGGAT CGAGGTCCAC
GCGGCCAACG GCTACCTCCT CCACGAGTTC GTCGACCCGC TGGTCAATGA CCGCGACGAC
GAGTACGGGG GCTCGCCGGC TAACCGGGCG CGCTTCCCCG CCGAGGTGAC CGCCGCCATC
GACGACGCCA CGCCCGACGA CTTCGTCGTC GGAGTCCGCG CCTCGCAGGC GGCCGTCACC
GACGAGGAGC GGGTCTGGCC CGACGGCGAG GCGACCGCCG CCGCGCTGTT CGACGCGCTC
TCAAACGCCG GCGCCGACTA CGTTCACGTC ACCGGCGGCG ACGCGACCGC CGCGGAGGTG
CCGGACACCG ATCGCACGCT CGCGGACCTC GCGGTCGAGC ACGTCGACGA CGACGTCGCC
GTGATCGCCA ACGGAAGACT CGGAGACCCG GAGCGCGCGC GGGCGGCGCT GGCAGACGGA
TCCGACCTGA TCACTCTCGG AACCGGCGCG CTCGCGAACC ACGACTGGCC CGATCGGGTC
CGAGCGGGCG AGGCGCTCGA CGATCTGGAC CCAAGCGTCG TCTTCGAGCC CGACGCCTCG
CTTAGCGACG CCGAGGTCCC CGGCGACGAC TGA
 
Protein sequence
MLCDRTHTSA GSLCFRRRYV NAMTDDPLFD EFELSGHVLD NRVGLAPMTR TSATDAGHAT 
DRMARYYASF ARGGFSFLVT EGVHPDATHS QGYLNQPGLA TDEQAAAWER VVDAVHEEGS
PIFAQLMHAG AQAQGNRYGY DPVAPSPYRP PGEMAELYGG SGAFPEADPL DDEGLDEARE
GFVAAAERAV EAGFDGIEVH AANGYLLHEF VDPLVNDRDD EYGGSPANRA RFPAEVTAAI
DDATPDDFVV GVRASQAAVT DEERVWPDGE ATAAALFDAL SNAGADYVHV TGGDATAAEV
PDTDRTLADL AVEHVDDDVA VIANGRLGDP ERARAALADG SDLITLGTGA LANHDWPDRV
RAGEALDDLD PSVVFEPDAS LSDAEVPGDD