Gene Hlac_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2641 
Symbol 
ID7400846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2623486 
End bp2624715 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID643709713 
Productband 7 protein 
Protein accessionYP_002567282 
Protein GI222481045 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAC AAGGTCCGCG CGGCGACGCC TTCGAGATCG GGAAGGCGAC GGGGTCGATC 
CCGGACGCCG TCTGGCAGTA CACCGCGCTC GCTGGTGCGC TCGTCGTCGG CTTCGCCCTC
CTCAGCCAGA GCCTCGTCTA CGGCGTCGCG GCGCTCGCGG TGTTGGTAGT GGCGGTTACG
ATCGTTAGTG CGGTCGAGAT CGTCGACGCC TACGACAAGG AGGCGCTCAC GGTGTTCGGC
GAGTTTCGGA AGCTGCTCGA ACCGGGCGTC CACCTCATTC CGCCGTTCGT CTCCCGCACC
TACGCGTTCG ACATGCGGAC CCAGACACTC GACGTCCCGC AGCAAGAGGC GATCACGCGG
GACAACTCGC CGGTGACGGC GGACGCGGTC GTCTACATCA AGGTGATGGA CGCCAAGAAG
GCGTTCCTCG AAGTGGACGA CTACAAAAAC GCCGTCTCGA ACCTCGCACA GACCACCCTC
CGCGCCGTCC TCGGCGACAT GGAACTCGAC GACACGCTCT CCCGACGCGA TCAGATCAAC
GACCGCATCA ACGAAGAGTT AGACGAGCCG ACCGACGAGT GGGGGATCCG CGTCGAGGCG
GTCGAGGTCC GCGAGGTGAG CCCCTCACAG GAGGTCCAGC GCGCGATGGA ACAACAGACC
GGCGCCGAGC GTCGCCGTCG GGCAATGATC CTCGAAGCCC AGGGGGAACG CCGCTCCGCG
ATCGAGCAGG CGGAAGGGGA CAAGCAGTCC AACATCATTC GCGCACAGGG TGAAAAGCAG
AGCCAGATCC TCGAAGCGCA GGGTGACGCG ATTTCCACCG TCCTCCGCGC CCGGTCCGCC
GAGTCGATGG GCGAGCGCGC CATCATCGAG CGCGGCATGG AGACCTTAGA AGAAATTGGC
AAAGGCGAAT CCACCACGTT CGTGCTCCCG CAGGAGCTCA CCAGCCTCGT CGGCCGCTAC
GGCAAGGCCC TCTCAGGCTC CGACGTGCAA CAGATGGAGG GGTTAGAGAG CAAGGAGTTC
GACGAGGAGA CGGAGAAGAT GCTCGGACTG GAGGATATCG AGAGCGCCCT CGAACAGCTC
GATACGGTGG CCGACAGCGA TCTCCGGACC GACGAGACGC GCGACGCGGA CACGGCCCGC
GACGTCGACC TCGCTCGCCA AGAGGAGGAA ACGCGCGAGG CAGACCGCGA TATCGAGCTG
GAGGCCGAAA GCGAGCGGCC GGGGAACTGA
 
Protein sequence
MGTQGPRGDA FEIGKATGSI PDAVWQYTAL AGALVVGFAL LSQSLVYGVA ALAVLVVAVT 
IVSAVEIVDA YDKEALTVFG EFRKLLEPGV HLIPPFVSRT YAFDMRTQTL DVPQQEAITR
DNSPVTADAV VYIKVMDAKK AFLEVDDYKN AVSNLAQTTL RAVLGDMELD DTLSRRDQIN
DRINEELDEP TDEWGIRVEA VEVREVSPSQ EVQRAMEQQT GAERRRRAMI LEAQGERRSA
IEQAEGDKQS NIIRAQGEKQ SQILEAQGDA ISTVLRARSA ESMGERAIIE RGMETLEEIG
KGESTTFVLP QELTSLVGRY GKALSGSDVQ QMEGLESKEF DEETEKMLGL EDIESALEQL
DTVADSDLRT DETRDADTAR DVDLARQEEE TREADRDIEL EAESERPGN